RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 ZSCAN9O15535 394 aaPredicted RBP4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 SRGAP2O75044 1071 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 RPP40O75818 363 aaKnown RBP4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 HNRNPA1P09651 372 aaKnown RBP eCLIP4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 RPS6KB1P23443 525 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 PPIFP30405 207 aaKnown RBP4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 CCT4P50991 539 aaKnown RBP4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 TIAL1Q01085 375 aaKnown RBP eCLIP4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 ZNF844Q08AG5 666 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 BAK1Q16611 211 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 SPATA31A3Q5VYP0 1347 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 ATG16L1Q676U5 607 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 TMEM108Q6UXF1 575 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 SLC30A10Q6XR72 485 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 RASGRP2Q7LDG7 609 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 RHOT2Q8IXI1 618 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 TCP11L2Q8N4U5 519 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 TDRD7Q8NHU6 1098 aaKnown RBP4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 SUN3Q8TAQ9 357 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 ADAMTS15Q8TE58 950 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 UCMAQ8WVF2 138 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 WDR60Q8WVS4 1066 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 C3orf49Q96BT1 292 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 PNKPQ96T60 521 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 PAAF1Q9BRP4 392 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 NOD2Q9HC29 1040 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 GBA2Q9HCG7 927 aaPredicted RBP4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 NDUFAF4Q9P032 175 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 POGKQ9P215 609 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 KCND3Q9UK17 655 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 SSX2IPQ9Y2D8 614 aa4.59□□□□□ -1.67
LSM6P2-201ENST00000552208 GXYLT2A0PJZ3 443 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 VWA3AA6NCI4 1184 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 RGS10O43665 173 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 KRT38O76015 456 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 RTN3O95197 1032 aaPredicted RBP4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 CER1O95813 267 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 CSF1P09603 554 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 SPATA31D3P0C874 917 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 HGFP14210 728 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 KCNA2P16389 499 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 GNAT2P19087 354 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 HK1P19367 917 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 TGM1P22735 817 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 SERPINA4P29622 427 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 NTSR1P30989 418 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 AKT1P31749 480 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 UQCRC1P31930 480 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 MAGEA10P43363 369 aaPredicted RBP4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 MC2RQ01718 297 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 NUCB1Q02818 461 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 MESP2Q0VG99 397 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 CCNIQ14094 377 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 NFIXQ14938 502 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 ANKRD1Q15327 319 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 WDR45BQ5MNZ6 344 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 C1QL3Q5VWW1 255 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 FAM205BPQ63HN1 556 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 ITPRIPL1Q6GPH6 555 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 MSANTD2Q6P1R3 559 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 LAYNQ6UX15 382 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 SPATA31D4Q6ZUB0 917 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 SYT13Q7L8C5 426 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 TRABD2AQ86V40 505 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 ELOA2Q8IYF1 753 aaPredicted RBP4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 OR8H2Q8N162 312 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 FAM109AQ8N4B1 249 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 CPT1BQ92523 772 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 GOLGA1Q92805 767 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 MECRQ9BV79 373 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 PLA2G12BQ9BX93 195 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 C12orf65Q9H3J6 166 aaKnown RBP4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 TBX20Q9UMR3 447 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 NFU1Q9UMS0 254 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 RRP7AQ9Y3A4 280 aaKnown RBP4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 SH3BP1Q9Y3L3 701 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 KCTD3Q9Y597 815 aa4.58□□□□□ -1.68
LSM6P2-201ENST00000552208 TDRD9Q8NDG6 1382 aaKnown RBP4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 KIF28PB7ZC32 967 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 STX16-NPEPL1H3BU86 382 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 STX16O14662 325 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 NOBOXO60393 691 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 CDC14BO60729 498 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 LMNAP02545 664 aaKnown RBP4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 RAD52P43351 418 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 GATMP50440 423 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 ANXA11P50995 505 aaKnown RBP4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 PGDP52209 483 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 ATXN1P54253 815 aaKnown RBP4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 SATB1Q01826 763 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 MTAPQ13126 283 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 DCTN1Q14203 1278 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 KRT32Q14532 448 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 GRM7Q14831 915 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 ACOX1Q15067 660 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 MEA1Q16626 185 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 CTXN3Q4LDR2 81 aa4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 DCAF17Q5H9S7 520 aaPredicted RBP4.57□□□□□ -1.68
LSM6P2-201ENST00000552208 CERCAMQ5T4B2 595 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms