RNA–Protein interactions for RNA: ENST00000551016.5

RACGAP1-221, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-221ENST00000551016 KCNJ11Q14654 390 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 TMCO4Q5TGY1 634 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 SWSAP1Q6NVH7 229 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 NPNTQ6UXI9 565 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 RNF111Q6ZNA4 994 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 SLC26A11Q86WA9 606 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 EMC1Q8N766 993 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 MCPH1Q8NEM0 835 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 PYDC1Q8WXC3 89 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 TFAP2BQ92481 460 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 NCSTNQ92542 709 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 TMEM143Q96AN5 459 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 RILPQ96NA2 401 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 RMDN3Q96TC7 470 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 NDNQ99608 321 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 PDCD2LQ9BRP1 358 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 CENPKQ9BS16 269 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 MSTO1Q9BUK6 570 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 FRMD8P1Q9BZ68 369 aaPredicted RBP7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 UGT1A7Q9HAW7 530 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 UGT1A10Q9HAW8 530 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 UGT1A8Q9HAW9 530 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 GPAMQ9HCL2 828 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 S100A14Q9HCY8 104 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 DNAJB4Q9UDY4 337 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 EFR3BQ9Y2G0 817 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 HBS1LQ9Y450 684 aaKnown RBP7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 STYXL1Q9Y6J8 313 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 CNTNAP2Q9UHC6 1331 aa7.4□□□□□ -1.22
RACGAP1-221ENST00000551016 COL2A1P02458 1487 aaPredicted RBP7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 A0A0B4J269 797 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 MCF2LO15068 1137 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 RFPL1O75677 317 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 SORBS2O94875 1100 aaKnown RBP7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 EDN1P05305 212 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 KRT7P08729 469 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 SNRPAP09012 282 aaKnown RBP7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 C6orf222P0C671 652 aaPredicted RBP7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 SPATA31D3P0C874 917 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 CPOXP36551 454 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 SLC25A3Q00325 362 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 TAP1Q03518 808 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 DGKZQ13574 1117 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 TAZQ16635 292 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 PTPN20Q4JDL3 420 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 SFT2D3Q587I9 215 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 LPCAT4Q643R3 524 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 ATG16L1Q676U5 607 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 DENND1BQ6P3S1 775 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 KYAT3Q6YP21 454 aaKnown RBP7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 ZCCHC23Q6ZST2 131 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 SPATA31D4Q6ZUB0 917 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 MARK2Q7KZI7 788 aaKnown RBP7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 RASSF3Q86WH2 238 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 PDSS2Q86YH6 399 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 CRLF3Q8IUI8 442 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 NUDCD3Q8IVD9 361 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 TRIM42Q8IWZ5 723 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 THNSL1Q8IYQ7 743 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 ST13P4Q8IZP2 240 aaPredicted RBP7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 KCTD6Q8NC69 237 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 OR6Y1Q8NGX8 325 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 SPATA18Q8TC71 538 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 FAM172AQ8WUF8 416 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 HSPH1Q92598 858 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 SMYD3Q9H7B4 428 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 CYP26B1Q9NR63 512 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 PXMP2Q9NR77 195 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 SMYD2Q9NRG4 433 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 CISHQ9NSE2 258 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 IRAK4Q9NWZ3 460 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 SIRPGQ9P1W8 387 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 TBC1D30Q9Y2I9 924 aa7.4□□□□□ -1.23
RACGAP1-221ENST00000551016 KIAA1217Q5T5P2 1943 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 ARHGAP42A6NI28 874 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 SDR42E2A6NKP2 422 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 APOC4-APOC2K7ER74 178 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 OPHN1O60890 802 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 FKBP6O75344 327 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 KRT37O76014 449 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 TOP3BO95985 862 aaKnown RBP7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 APOC2P02655 101 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 PYGLP06737 847 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 SERPINA6P08185 405 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 KRT3P12035 628 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 YY1P25490 414 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 GRIA2P42262 883 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 RANBP1P43487 201 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 MYL6P60660 151 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 YWHAZP63104 245 aaKnown RBP7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 IRX4P78413 519 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 ROR1Q01973 937 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 PRKCEQ02156 737 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 GHRHRQ02643 423 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 MMRN1Q13201 1228 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 MSLNQ13421 630 aaPredicted RBP7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 HNRNPDQ14103 355 aaKnown RBP7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 HADHQ16836 314 aaKnown RBP7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 TBC1D25Q3MII6 688 aa7.39□□□□□ -1.23
RACGAP1-221ENST00000551016 MTERF2Q49AM1 385 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms