RNA–Protein interactions for RNA: ENST00000550851.5

LGR5-206, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 2

Gene LGR5, Length 4,095 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-206ENST00000550851 SDK1Q7Z5N4 2213 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.11□□□□□ -0.47
LGR5-206ENST00000550851 SNRPAP09012 282 aaKnown RBP12.11□□□□□ -0.47
LGR5-206ENST00000550851 ELNP15502 786 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 SSTR1P30872 391 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 SLC8A1P32418 973 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 KDSRQ06136 332 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 MAMLD1Q13495 774 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 MAP3K21Q5TCX8 1036 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 AGBL2Q5U5Z8 902 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 FAM171A1Q5VUB5 890 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 TFAP2DQ7Z6R9 452 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 TTC30AQ86WT1 665 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 VCPIP1Q96JH7 1222 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 RNF208Q9H0X6 261 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 SLC39A10Q9ULF5 831 aa12.11□□□□□ -0.47
LGR5-206ENST00000550851 SLC15A5A6NIM6 579 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 TRIM66O15016 1216 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 SNX2O60749 519 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 ASS1P00966 412 aaKnown RBP12.1□□□□□ -0.47
LGR5-206ENST00000550851 HARS2P49590 506 aaKnown RBP12.1□□□□□ -0.47
LGR5-206ENST00000550851 NETO2Q8NC67 525 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 ARMC2Q8NEN0 867 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 EGFL8Q99944 293 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 FOXP3Q9BZS1 431 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 ROPN1BQ9BZX4 212 aaPredicted RBP12.1□□□□□ -0.47
LGR5-206ENST00000550851 ROPN1Q9HAT0 212 aaPredicted RBP12.1□□□□□ -0.47
LGR5-206ENST00000550851 NMRK2Q9NPI5 230 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 AVENQ9NQS1 362 aaPredicted RBP12.1□□□□□ -0.47
LGR5-206ENST00000550851 ZNF446Q9NWS9 450 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 RBPJLQ9UBG7 517 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 SMG5Q9UPR3 1016 aaKnown RBP12.1□□□□□ -0.47
LGR5-206ENST00000550851 PPME1Q9Y570 386 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 SLC12A8A0AV02 714 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 SCAMP3O14828 347 aaKnown RBP12.1□□□□□ -0.47
LGR5-206ENST00000550851 ALDH1A1P00352 501 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 ALDH2P05091 517 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 CKMP06732 381 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 SKIP12755 728 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 ETS1P14921 441 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 PECAM1P16284 738 aaPredicted RBP12.1□□□□□ -0.47
LGR5-206ENST00000550851 VCPP55072 806 aaKnown RBP12.1□□□□□ -0.47
LGR5-206ENST00000550851 SPIRE1Q08AE8 756 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 PDK2Q15119 407 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 PPHLN1Q8NEY8 458 aaKnown RBP12.1□□□□□ -0.47
LGR5-206ENST00000550851 LRRC15Q8TF66 581 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 LRGUKQ96M69 825 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 FAM111AQ96PZ2 611 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 TSSK1BQ9BXA7 367 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 ULBP1Q9BZM6 244 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 DHX33Q9H6R0 707 aaKnown RBP12.1□□□□□ -0.47
LGR5-206ENST00000550851 SMPD4Q9NXE4 827 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 HMGCRP04035 888 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 USP17L7P0C7H9 530 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 SETSIPP0DME0 302 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 MARSP56192 900 aaKnown RBP12.1□□□□□ -0.47
LGR5-206ENST00000550851 ACTN3Q08043 901 aaPredicted RBP12.1□□□□□ -0.47
LGR5-206ENST00000550851 DUSP28Q4G0W2 176 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 APTXQ7Z2E3 356 aaKnown RBP12.1□□□□□ -0.47
LGR5-206ENST00000550851 SGSM3Q96HU1 749 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 TASP1Q9H6P5 420 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 ARHGAP28Q9P2N2 729 aa12.1□□□□□ -0.47
LGR5-206ENST00000550851 TTC4O95801 387 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 PAEPP09466 180 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 GFAPP14136 432 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 TGM2P21980 687 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 PPARGP37231 505 aaPredicted RBP12.09□□□□□ -0.47
LGR5-206ENST00000550851 RTP1P59025 263 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 TTC30BQ8N4P2 665 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 C7orf43Q8WVR3 580 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 C18orf25Q96B23 403 aaPredicted RBP12.09□□□□□ -0.47
LGR5-206ENST00000550851 MFSD14AQ96MC6 490 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 ZFP42Q96MM3 310 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 HMX1Q9NP08 348 aaPredicted RBP12.09□□□□□ -0.47
LGR5-206ENST00000550851 SPECC1L-ADORA2AF8WAN1 911 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 MEFVO15553 781 aaPredicted RBP12.09□□□□□ -0.47
LGR5-206ENST00000550851 USP12O75317 370 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 CHEK2O96017 543 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 F9P00740 461 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 PRKAR2AP13861 404 aaKnown RBP12.09□□□□□ -0.47
LGR5-206ENST00000550851 CALRP27797 417 aaKnown RBP12.09□□□□□ -0.47
LGR5-206ENST00000550851 GEMIN4P57678 1058 aaKnown RBP12.09□□□□□ -0.47
LGR5-206ENST00000550851 NOMO3P69849 1222 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 BMPR2Q13873 1038 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 ERP27Q96DN0 273 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 ATXN3LQ9H3M9 355 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 WHRNQ9P202 907 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 CPSF2Q9P2I0 782 aaKnown RBP12.09□□□□□ -0.47
LGR5-206ENST00000550851 TRPV2Q9Y5S1 764 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 TBKBP1A7MCY6 615 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 KPNA6O60684 536 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 OPHN1O60890 802 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 CD52P31358 61 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 ALDH18A1P54886 795 aaKnown RBP12.09□□□□□ -0.47
LGR5-206ENST00000550851 RAD51Q06609 339 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 BFSP2Q13515 415 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 LRRC34Q8IZ02 419 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 BLOC1S5Q8TDH9 187 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 KAT2BQ92831 832 aa12.09□□□□□ -0.47
LGR5-206ENST00000550851 SEC16BQ96JE7 1060 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms