RNA–Protein interactions for RNA: ENST00000550678.1

LINC02388-201, Transcript of long intergenic non-protein coding RNA 2388, humanhuman

TSL 2 BASIC

Gene LINC02388, Length 1,975 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02388-201ENST00000550678 TUBE1Q9UJT0 475 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CPSF3Q9UKF6 684 aaKnown RBP6.73□□□□□ -1.33
LINC02388-201ENST00000550678 PTPN22Q9Y2R2 807 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 PCDHGB6Q9Y5F9 930 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 TRPV2Q9Y5S1 764 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 VWDEQ8N2E2 1590 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 ABCC6O95255 1503 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 LMTK2Q8IWU2 1503 aa6.73□□□□□ -1.33
LINC02388-201ENST00000550678 CHD2O14647 1828 aaKnown RBP6.72□□□□□ -1.33
LINC02388-201ENST00000550678 SBNO1A3KN83 1393 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 KIAA1217Q5T5P2 1943 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 UGGT1Q9NYU2 1555 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 FAM83GA6ND36 823 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 SNTNA6NMZ2 147 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 PROM1O43490 865 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 SLC25A17O43808 307 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 GJB3O75712 270 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 DNAJC8O75937 253 aaPredicted RBP6.72□□□□□ -1.33
LINC02388-201ENST00000550678 PIGNO95427 931 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 FAM107AO95990 144 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 EGFRP00533 1210 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 ITGB3P05106 788 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 UBTFL6P0CB48 400 aaPredicted RBP6.72□□□□□ -1.33
LINC02388-201ENST00000550678 GSTT2P0CG29 244 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 GSTT2BP0CG30 244 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 RAG1P15918 1043 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 ABCB4P21439 1286 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 PTBP1P26599 531 aaKnown RBP eCLIP6.72□□□□□ -1.33
LINC02388-201ENST00000550678 SCTRP47872 440 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 GDI2P50395 445 aaKnown RBP6.72□□□□□ -1.33
LINC02388-201ENST00000550678 HDGFP51858 240 aaKnown RBP6.72□□□□□ -1.33
LINC02388-201ENST00000550678 MTTPP55157 894 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 ELF3P78545 371 aaPredicted RBP6.72□□□□□ -1.33
LINC02388-201ENST00000550678 ABATP80404 500 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 COL9A3Q14050 684 aaPredicted RBP6.72□□□□□ -1.33
LINC02388-201ENST00000550678 DMC1Q14565 340 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 SGCAQ16586 387 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 SLC44A4Q53GD3 710 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 CLVS2Q5SYC1 327 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 PPP1R26Q5T8A7 1209 aaPredicted RBP6.72□□□□□ -1.33
LINC02388-201ENST00000550678 SHEQ5VZ18 495 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 ERICH5Q6P6B1 374 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 ZCCHC12Q6PEW1 402 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 CATSPERGQ6ZRH7 1159 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 Q6ZUG5 572 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 TRAPPC11Q7Z392 1133 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 CCDC25Q86WR0 208 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 STX12Q86Y82 276 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 TRMT44Q8IYL2 757 aaKnown RBP6.72□□□□□ -1.33
LINC02388-201ENST00000550678 SCAIQ8N9R8 606 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 EHBP1Q8NDI1 1231 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 TTC16Q8NEE8 873 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 OR9A1PQ8NGU1 263 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 ZNF671Q8TAW3 534 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 SLC5A11Q8WWX8 675 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 MAP4K1Q92918 833 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 KIAA1191Q96A73 305 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 CCDC74AQ96AQ1 378 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 TRIM43Q96BQ3 446 aaPredicted RBP6.72□□□□□ -1.33
LINC02388-201ENST00000550678 PKP4Q99569 1192 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 CINPQ9BW66 212 aaPredicted RBP6.72□□□□□ -1.33
LINC02388-201ENST00000550678 PACSIN1Q9BY11 444 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 NUF2Q9BZD4 464 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 CEP44Q9C0F1 390 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 OR10A4Q9H209 315 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 CARD9Q9H257 536 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 SNX25Q9H3E2 840 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 OCEL1Q9H607 264 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 AZI2Q9H6S1 392 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 C19orf44Q9H6X5 657 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 LRRC19Q9H756 370 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 SARS2Q9NP81 518 aaKnown RBP6.72□□□□□ -1.33
LINC02388-201ENST00000550678 SERINC1Q9NRX5 453 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 GDAP2Q9NXN4 497 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 APOBEC2Q9Y235 224 aaKnown RBP6.72□□□□□ -1.33
LINC02388-201ENST00000550678 TNFSF13BQ9Y275 285 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 STK38LQ9Y2H1 464 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 SPEF1Q9Y4P9 236 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 KDM6AO15550 1401 aaPredicted RBP6.72□□□□□ -1.33
LINC02388-201ENST00000550678 RIMS2Q9UQ26 1411 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 DIP2BQ9P265 1576 aa6.72□□□□□ -1.33
LINC02388-201ENST00000550678 USP42Q9H9J4 1324 aaKnown RBP6.72□□□□□ -1.33
LINC02388-201ENST00000550678 A0A0G2JS52 829 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 NUDT19A8MXV4 375 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 GPR89AB7ZAQ6 455 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 H0YIN7 160 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 TPP1O14773 563 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 TRAPPC3O43617 180 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 ANP32DO95626 131 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 HMOX1P09601 288 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 FAM153BP0C7A2 387 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 MYZAPP0CAP1 466 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 GPR89BP0CG08 455 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 C6P13671 934 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 ANPEPP15144 967 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 LAG3P18627 525 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 HLA-DPA1P20036 260 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 IL11P20809 199 aa6.71□□□□□ -1.33
LINC02388-201ENST00000550678 TKTP29401 623 aaKnown RBP6.71□□□□□ -1.33
LINC02388-201ENST00000550678 TLX1P31314 330 aaPredicted RBP6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms