RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 ADH5P11766 374 aa24.5■■□□□ 1.51
SMARCD1-209ENST00000550477 TNFRSF4P43489 277 aa24.5■■□□□ 1.51
SMARCD1-209ENST00000550477 ZNF699Q32M78 642 aa24.5■■□□□ 1.51
SMARCD1-209ENST00000550477 SHC4Q6S5L8 630 aa24.5■■□□□ 1.51
SMARCD1-209ENST00000550477 TRMT11Q7Z4G4 463 aaKnown RBP24.5■■□□□ 1.51
SMARCD1-209ENST00000550477 CEP57L1Q8IYX8 460 aa24.5■■□□□ 1.51
SMARCD1-209ENST00000550477 WHAMMQ8TF30 809 aa24.5■■□□□ 1.51
SMARCD1-209ENST00000550477 DPEP3Q9H4B8 488 aa24.5■■□□□ 1.51
SMARCD1-209ENST00000550477 VRTNQ9H8Y1 702 aa24.5■■□□□ 1.51
SMARCD1-209ENST00000550477 BCCIPQ9P287 314 aaKnown RBP eCLIP24.5■■□□□ 1.51
SMARCD1-209ENST00000550477 CLDN5O00501 218 aa24.49■■□□□ 1.51
SMARCD1-209ENST00000550477 ZBTB24O43167 697 aaPredicted RBP24.49■■□□□ 1.51
SMARCD1-209ENST00000550477 KRT37O76014 449 aa24.49■■□□□ 1.51
SMARCD1-209ENST00000550477 PMLP29590 882 aa24.49■■□□□ 1.51
SMARCD1-209ENST00000550477 TIE1P35590 1138 aa24.49■■□□□ 1.51
SMARCD1-209ENST00000550477 DPP6P42658 865 aa24.49■■□□□ 1.51
SMARCD1-209ENST00000550477 DHPSP49366 369 aaPredicted RBP24.49■■□□□ 1.51
SMARCD1-209ENST00000550477 BMT2Q1RMZ1 405 aa24.49■■□□□ 1.51
SMARCD1-209ENST00000550477 RHBDF2Q6PJF5 856 aa24.49■■□□□ 1.51
SMARCD1-209ENST00000550477 LPCAT2Q7L5N7 544 aa24.49■■□□□ 1.51
SMARCD1-209ENST00000550477 TXNDC5Q8NBS9 432 aaKnown RBP24.49■■□□□ 1.51
SMARCD1-209ENST00000550477 SMARCD1Q96GM5 515 aa24.49■■□□□ 1.51
SMARCD1-209ENST00000550477 BLZF1Q9H2G9 400 aa24.49■■□□□ 1.51
SMARCD1-209ENST00000550477 DMAP1Q9NPF5 467 aaPredicted RBP24.49■■□□□ 1.51
SMARCD1-209ENST00000550477 CHORDC1Q9UHD1 332 aaPredicted RBP24.49■■□□□ 1.51
SMARCD1-209ENST00000550477 NUP205Q92621 2012 aa24.49■■□□□ 1.51
SMARCD1-209ENST00000550477 A0A0A0MRY4 1105 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 TBC1D3BA6NDS4 549 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 C4orf47A7E2U8 309 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 KLF8O95600 359 aaPredicted RBP24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 HSP90AA1P07900 732 aaKnown RBP24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 SLC6A11P48066 632 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 ME1P48163 572 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 TUBP50607 506 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 SHC2P98077 582 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 EHHADHQ08426 723 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 ATL3Q6DD88 541 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 TCEAL6Q6IPX3 200 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 PGBD3Q8N328 593 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 ALLCQ8N6M5 410 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 MDGA1Q8NFP4 955 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 KCNV2Q8TDN2 545 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 ZNF516Q92618 1163 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 TCEAL3Q969E4 200 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 XYLT2Q9H1B5 865 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 FBXO44Q9H4M3 255 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 TMEM9BQ9NQ34 198 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 CFAP45Q9UL16 551 aa24.48■■□□□ 1.51
SMARCD1-209ENST00000550477 KIAA1549LQ6ZVL6 1849 aa24.47■■□□□ 1.51
SMARCD1-209ENST00000550477 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.47■■□□□ 1.51
SMARCD1-209ENST00000550477 AFMP43652 599 aa24.47■■□□□ 1.51
SMARCD1-209ENST00000550477 NOVA1P51513 510 aaKnown RBP24.47■■□□□ 1.51
SMARCD1-209ENST00000550477 CACNA2D1P54289 1103 aa24.47■■□□□ 1.51
SMARCD1-209ENST00000550477 NCOA4Q13772 614 aa24.47■■□□□ 1.51
SMARCD1-209ENST00000550477 GAB4Q2WGN9 574 aa24.47■■□□□ 1.51
SMARCD1-209ENST00000550477 SNX30Q5VWJ9 437 aa24.47■■□□□ 1.51
SMARCD1-209ENST00000550477 PSAPL1Q6NUJ1 521 aa24.47■■□□□ 1.51
SMARCD1-209ENST00000550477 PIGKQ92643 395 aa24.47■■□□□ 1.51
SMARCD1-209ENST00000550477 KCNK16Q96T55 309 aa24.47■■□□□ 1.51
SMARCD1-209ENST00000550477 DNAI2Q9GZS0 605 aa24.47■■□□□ 1.51
SMARCD1-209ENST00000550477 NME7Q9Y5B8 376 aa24.47■■□□□ 1.51
SMARCD1-209ENST00000550477 MYOFQ9NZM1 2061 aa24.46■■□□□ 1.51
SMARCD1-209ENST00000550477 COCHO43405 550 aa24.46■■□□□ 1.51
SMARCD1-209ENST00000550477 SLC5A3P53794 718 aa24.46■■□□□ 1.51
SMARCD1-209ENST00000550477 GOLGA8FQ08AF8 430 aa24.46■■□□□ 1.51
SMARCD1-209ENST00000550477 GOLGA8DPQ0D2H9 430 aa24.46■■□□□ 1.51
SMARCD1-209ENST00000550477 LMAN2Q12907 356 aa24.46■■□□□ 1.51
SMARCD1-209ENST00000550477 SGSM1Q2NKQ1 1148 aa24.46■■□□□ 1.51
SMARCD1-209ENST00000550477 SPDYCQ5MJ68 293 aa24.46■■□□□ 1.51
SMARCD1-209ENST00000550477 LY6G5CQ5SRR4 150 aa24.46■■□□□ 1.51
SMARCD1-209ENST00000550477 FAM35AQ86V20 835 aa24.46■■□□□ 1.51
SMARCD1-209ENST00000550477 IL17RCQ8NAC3 791 aa24.46■■□□□ 1.51
SMARCD1-209ENST00000550477 PARD3BQ8TEW8 1205 aa24.46■■□□□ 1.51
SMARCD1-209ENST00000550477 NUSAP1Q9BXS6 441 aaKnown RBP24.46■■□□□ 1.51
SMARCD1-209ENST00000550477 DEC1Q9P2X7 70 aa24.46■■□□□ 1.51
SMARCD1-209ENST00000550477 LNP1A1A4G5 178 aa24.45■■□□□ 1.5
SMARCD1-209ENST00000550477 AP1G2O75843 785 aa24.45■■□□□ 1.5
SMARCD1-209ENST00000550477 RPN1P04843 607 aaKnown RBP24.45■■□□□ 1.5
SMARCD1-209ENST00000550477 CDH8P55286 799 aa24.45■■□□□ 1.5
SMARCD1-209ENST00000550477 KDSRQ06136 332 aa24.45■■□□□ 1.5
SMARCD1-209ENST00000550477 TMEM92Q6UXU6 159 aa24.45■■□□□ 1.5
SMARCD1-209ENST00000550477 TAF4BQ92750 862 aa24.45■■□□□ 1.5
SMARCD1-209ENST00000550477 SMYD3Q9H7B4 428 aa24.45■■□□□ 1.5
SMARCD1-209ENST00000550477 TLR8Q9NR97 1041 aaKnown RBP24.45■■□□□ 1.5
SMARCD1-209ENST00000550477 EXOC1Q9NV70 894 aa24.45■■□□□ 1.5
SMARCD1-209ENST00000550477 SGK1O00141 431 aa24.44■■□□□ 1.5
SMARCD1-209ENST00000550477 SCAMP3O14828 347 aaKnown RBP24.44■■□□□ 1.5
SMARCD1-209ENST00000550477 CUL4BQ13620 913 aa24.44■■□□□ 1.5
SMARCD1-209ENST00000550477 ANO4Q32M45 955 aa24.44■■□□□ 1.5
SMARCD1-209ENST00000550477 FOXD4L5Q5VV16 416 aaPredicted RBP24.44■■□□□ 1.5
SMARCD1-209ENST00000550477 SCAMP5Q8TAC9 235 aa24.44■■□□□ 1.5
SMARCD1-209ENST00000550477 OLIG1Q8TAK6 271 aa24.44■■□□□ 1.5
SMARCD1-209ENST00000550477 FOXD4L4Q8WXT5 416 aaPredicted RBP24.44■■□□□ 1.5
SMARCD1-209ENST00000550477 DUSP9Q99956 384 aaKnown RBP24.44■■□□□ 1.5
SMARCD1-209ENST00000550477 SPHK2Q9NRA0 654 aa24.44■■□□□ 1.5
SMARCD1-209ENST00000550477 TMEM30AQ9NV96 361 aa24.44■■□□□ 1.5
SMARCD1-209ENST00000550477 PCDHA7Q9UN72 937 aa24.44■■□□□ 1.5
SMARCD1-209ENST00000550477 MYO18AQ92614 2054 aaKnown RBP24.43■■□□□ 1.5
SMARCD1-209ENST00000550477 TNFRSF10BO14763 440 aa24.43■■□□□ 1.5
SMARCD1-209ENST00000550477 C4BPAP04003 597 aaKnown RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms