RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 SDCBP2Q9H190 292 aa21.12■□□□□ 0.97
GCN1-207ENST00000550471 GDPD2Q9HCC8 539 aa21.12■□□□□ 0.97
GCN1-207ENST00000550471 PCDHA5Q9Y5H7 936 aa21.12■□□□□ 0.97
GCN1-207ENST00000550471 OTOL1A6NHN0 477 aaPredicted RBP21.11■□□□□ 0.97
GCN1-207ENST00000550471 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.11■□□□□ 0.97
GCN1-207ENST00000550471 RETP07949 1114 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 ZDHHC11BP0C7U3 371 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 MXI1P50539 228 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 CACNA2D1P54289 1103 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 PPP3CAQ08209 521 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 GOLGA8FQ08AF8 430 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 GOLGA8DPQ0D2H9 430 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 NUDT18Q6ZVK8 323 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 SYT13Q7L8C5 426 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 TADA2BQ86TJ2 420 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 KIAA2013Q8IYS2 634 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 FBXL13Q8NEE6 735 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 TTC16Q8NEE8 873 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 SPATA20Q8TB22 786 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 SLC2A14Q8TDB8 520 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 CHAMP1Q96JM3 812 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 KCNK16Q96T55 309 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 RNF38Q9H0F5 515 aa21.11■□□□□ 0.97
GCN1-207ENST00000550471 CILPO75339 1184 aa21.1■□□□□ 0.97
GCN1-207ENST00000550471 PSEN1P49768 467 aa21.1■□□□□ 0.97
GCN1-207ENST00000550471 IFRD2Q12894 506 aaPredicted RBP21.1■□□□□ 0.97
GCN1-207ENST00000550471 PUM1Q14671 1186 aaKnown RBP eCLIP21.1■□□□□ 0.97
GCN1-207ENST00000550471 HSF5Q4G112 596 aaPredicted RBP21.1■□□□□ 0.97
GCN1-207ENST00000550471 ADGRG2Q8IZP9 1017 aa21.1■□□□□ 0.97
GCN1-207ENST00000550471 ENGASEQ8NFI3 743 aa21.1■□□□□ 0.97
GCN1-207ENST00000550471 TAS1R2Q8TE23 839 aa21.1■□□□□ 0.97
GCN1-207ENST00000550471 CYFIP2Q96F07 1278 aa21.1■□□□□ 0.97
GCN1-207ENST00000550471 LOXL4Q96JB6 756 aa21.1■□□□□ 0.97
GCN1-207ENST00000550471 CDK5RAP1Q96SZ6 601 aaKnown RBP21.1■□□□□ 0.97
GCN1-207ENST00000550471 NACA2Q9H009 215 aa21.1■□□□□ 0.97
GCN1-207ENST00000550471 TMEM30AQ9NV96 361 aa21.1■□□□□ 0.97
GCN1-207ENST00000550471 SH3BP1Q9Y3L3 701 aa21.1■□□□□ 0.97
GCN1-207ENST00000550471 MYO15AQ9UKN7 3530 aa21.1■□□□□ 0.97
GCN1-207ENST00000550471 PSMA7O14818 248 aa21.09■□□□□ 0.97
GCN1-207ENST00000550471 RNF40O75150 1001 aa21.09■□□□□ 0.97
GCN1-207ENST00000550471 EGFP01133 1207 aa21.09■□□□□ 0.97
GCN1-207ENST00000550471 TRIM49P0CI25 452 aa21.09■□□□□ 0.97
GCN1-207ENST00000550471 TRIM49CP0CI26 452 aa21.09■□□□□ 0.97
GCN1-207ENST00000550471 FNTBP49356 437 aa21.09■□□□□ 0.97
GCN1-207ENST00000550471 SLC8A3P57103 927 aa21.09■□□□□ 0.97
GCN1-207ENST00000550471 YWHAEP62258 255 aaKnown RBP21.09■□□□□ 0.97
GCN1-207ENST00000550471 PNOCQ13519 176 aa21.09■□□□□ 0.97
GCN1-207ENST00000550471 FOXR2Q6PJQ5 311 aa21.09■□□□□ 0.97
GCN1-207ENST00000550471 CEP68Q76N32 757 aa21.09■□□□□ 0.97
GCN1-207ENST00000550471 FILIP1Q7Z7B0 1213 aa21.09■□□□□ 0.97
GCN1-207ENST00000550471 SMOQ99835 787 aa21.09■□□□□ 0.97
GCN1-207ENST00000550471 LINC00597Q9H2U6 94 aa21.09■□□□□ 0.97
GCN1-207ENST00000550471 METTL14Q9HCE5 456 aaKnown RBP21.09■□□□□ 0.97
GCN1-207ENST00000550471 RAB20Q9NX57 234 aa21.09■□□□□ 0.97
GCN1-207ENST00000550471 CFAP97Q9P2B7 532 aa21.09■□□□□ 0.97
GCN1-207ENST00000550471 SCML2Q9UQR0 700 aa21.09■□□□□ 0.97
GCN1-207ENST00000550471 PRCPP42785 496 aa21.08■□□□□ 0.97
GCN1-207ENST00000550471 MAP3K7CLP57077 242 aa21.08■□□□□ 0.97
GCN1-207ENST00000550471 SPOPLQ6IQ16 392 aa21.08■□□□□ 0.97
GCN1-207ENST00000550471 KLHDC10Q6PID8 442 aa21.08■□□□□ 0.97
GCN1-207ENST00000550471 PRR23BQ6ZRT6 265 aa21.08■□□□□ 0.97
GCN1-207ENST00000550471 C11orf74Q86VG3 221 aa21.08■□□□□ 0.97
GCN1-207ENST00000550471 ZC3H3Q8IXZ2 948 aaKnown RBP21.08■□□□□ 0.97
GCN1-207ENST00000550471 ZNF276Q8N554 614 aa21.08■□□□□ 0.97
GCN1-207ENST00000550471 SCAMP5Q8TAC9 235 aa21.08■□□□□ 0.97
GCN1-207ENST00000550471 CHFRQ96EP1 664 aa21.08■□□□□ 0.97
GCN1-207ENST00000550471 DHTKD1Q96HY7 919 aaPredicted RBP21.08■□□□□ 0.97
GCN1-207ENST00000550471 UBXN6Q9BZV1 441 aa21.08■□□□□ 0.97
GCN1-207ENST00000550471 CHORDC1Q9UHD1 332 aaPredicted RBP21.08■□□□□ 0.97
GCN1-207ENST00000550471 HELZP42694 1942 aaKnown RBP21.08■□□□□ 0.96
GCN1-207ENST00000550471 COCHO43405 550 aa21.07■□□□□ 0.96
GCN1-207ENST00000550471 CCDC130P13994 396 aa21.07■□□□□ 0.96
GCN1-207ENST00000550471 MRPS21P82921 87 aaKnown RBP21.07■□□□□ 0.96
GCN1-207ENST00000550471 GAD2Q05329 585 aa21.07■□□□□ 0.96
GCN1-207ENST00000550471 DHCR24Q15392 516 aa21.07■□□□□ 0.96
GCN1-207ENST00000550471 BTBD8Q5XKL5 378 aa21.07■□□□□ 0.96
GCN1-207ENST00000550471 CACNA2D4Q7Z3S7 1137 aa21.07■□□□□ 0.96
GCN1-207ENST00000550471 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.07■□□□□ 0.96
GCN1-207ENST00000550471 ZMIZ2Q8NF64 920 aa21.07■□□□□ 0.96
GCN1-207ENST00000550471 KCNV2Q8TDN2 545 aa21.07■□□□□ 0.96
GCN1-207ENST00000550471 GAB3Q8WWW8 586 aa21.07■□□□□ 0.96
GCN1-207ENST00000550471 APOBEC3GQ9HC16 384 aaKnown RBP21.07■□□□□ 0.96
GCN1-207ENST00000550471 CYLDQ9NQC7 956 aa21.07■□□□□ 0.96
GCN1-207ENST00000550471 FAM49BQ9NUQ9 324 aa21.07■□□□□ 0.96
GCN1-207ENST00000550471 SMPD4Q9NXE4 827 aa21.07■□□□□ 0.96
GCN1-207ENST00000550471 EBF1Q9UH73 591 aa21.07■□□□□ 0.96
GCN1-207ENST00000550471 GPR179Q6PRD1 2367 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 HRO43593 1189 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 TLR5O60602 858 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 APBB3O95704 486 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 CYP17A1P05093 508 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 ATP5C1P36542 298 aaKnown RBP21.06■□□□□ 0.96
GCN1-207ENST00000550471 ZXDBP98169 803 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 CLEC20AQ6ZU45 233 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 ARHGAP18Q8N392 663 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 DCLK2Q8N568 766 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 C12orf29Q8N999 325 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 RPLP0P6Q8NHW5 317 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 CEP63Q96MT8 703 aa21.06■□□□□ 0.96
GCN1-207ENST00000550471 PNKPQ96T60 521 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms