RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 WDR5BQ86VZ2 330 aa7.34□□□□□ -1.23
CBX5-204ENST00000550411 METTL23Q86XA0 190 aa7.34□□□□□ -1.23
CBX5-204ENST00000550411 TMEM86AQ8N2M4 240 aa7.34□□□□□ -1.23
CBX5-204ENST00000550411 PLPP7Q8NBV4 271 aa7.34□□□□□ -1.23
CBX5-204ENST00000550411 RIN3Q8TB24 985 aa7.34□□□□□ -1.23
CBX5-204ENST00000550411 SPATA18Q8TC71 538 aa7.34□□□□□ -1.23
CBX5-204ENST00000550411 DDX1Q92499 740 aaKnown RBP7.34□□□□□ -1.23
CBX5-204ENST00000550411 MYLPFQ96A32 169 aa7.34□□□□□ -1.23
CBX5-204ENST00000550411 LRRC3BQ96PB8 259 aa7.34□□□□□ -1.23
CBX5-204ENST00000550411 GCNAQ96QF7 691 aa7.34□□□□□ -1.23
CBX5-204ENST00000550411 SEPT5Q99719 369 aaPredicted RBP7.34□□□□□ -1.23
CBX5-204ENST00000550411 SYT15Q9BQS2 421 aa7.34□□□□□ -1.23
CBX5-204ENST00000550411 DPEP3Q9H4B8 488 aa7.34□□□□□ -1.23
CBX5-204ENST00000550411 TASP1Q9H6P5 420 aa7.34□□□□□ -1.23
CBX5-204ENST00000550411 C2orf42Q9NWW7 574 aa7.34□□□□□ -1.23
CBX5-204ENST00000550411 DDX43Q9NXZ2 648 aaKnown RBP7.34□□□□□ -1.23
CBX5-204ENST00000550411 ABI2Q9NYB9 513 aaPredicted RBP7.34□□□□□ -1.23
CBX5-204ENST00000550411 HMGXB4Q9UGU5 601 aa7.34□□□□□ -1.23
CBX5-204ENST00000550411 SOWAHDA6NJG2 315 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 MAPK13O15264 365 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 PRPF40AO75400 957 aaKnown RBP7.33□□□□□ -1.24
CBX5-204ENST00000550411 TACC1O75410 805 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 TNNI1P19237 187 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 NR2F2P24468 414 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 CYP2F1P24903 491 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 CDC25CP30307 473 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 HOXA6P31267 233 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 HOXC13P31276 330 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 PRCPP42785 496 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 RAP1GAPP47736 663 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 SERPINB4P48594 390 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 TSPY1Q01534 308 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 TNK2Q07912 1038 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 PPP3CAQ08209 521 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 KCNH2Q12809 1159 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 VEPH1Q14D04 833 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 TAF12Q16514 161 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 MGAT5BQ3V5L5 792 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 ZACNQ401N2 412 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 CFAP221Q4G0U5 840 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 AASDHQ4L235 1098 aaPredicted RBP7.33□□□□□ -1.24
CBX5-204ENST00000550411 COBLL1Q53SF7 1204 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 IL31Q6EBC2 164 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 SPOPLQ6IQ16 392 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 FAM171BQ6P995 826 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 SCARA5Q6ZMJ2 495 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 SV2AQ7L0J3 742 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 THEM5Q8N1Q8 247 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 PHTF2Q8N3S3 785 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 C12orf50Q8NA57 414 aaPredicted RBP7.33□□□□□ -1.24
CBX5-204ENST00000550411 SPPL2BQ8TCT7 592 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 GIPC2Q8TF65 315 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 C2orf15Q8WU43 125 aaKnown RBP7.33□□□□□ -1.24
CBX5-204ENST00000550411 EEF2KMTQ96G04 330 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 FNBP1Q96RU3 617 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 ACBD6Q9BR61 282 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 PI4K2AQ9BTU6 479 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 PRR14Q9BWN1 585 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 ARRDC1-AS1Q9H2J1 176 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 APOBEC3GQ9HC16 384 aaKnown RBP7.33□□□□□ -1.24
CBX5-204ENST00000550411 ABCB6Q9NP58 842 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 THG1LQ9NWX6 298 aaKnown RBP7.33□□□□□ -1.24
CBX5-204ENST00000550411 ZMYM5Q9UJ78 669 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 GTF3C4Q9UKN8 822 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 PCDHB5Q9Y5E4 795 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 PCDHA5Q9Y5H7 936 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 ACACAQ13085 2346 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 IGF2RP11717 2491 aa7.33□□□□□ -1.24
CBX5-204ENST00000550411 KNTC1P50748 2209 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 CCDC163A0A0D9SF12 145 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 TRIM49BA6NDI0 452 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 ATG13O75143 517 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 RPP40O75818 363 aaKnown RBP7.32□□□□□ -1.24
CBX5-204ENST00000550411 NOL4O94818 638 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 EPN2O95208 641 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 ASS1P00966 412 aaKnown RBP7.32□□□□□ -1.24
CBX5-204ENST00000550411 HLA-DRAP01903 254 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 F11P03951 625 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 ZNF806P0C7X5 589 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 CCDC192P0DO97 292 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 PCSK1P29120 753 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 AVPR1AP37288 418 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 MAGEA11P43364 429 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 ASPAP45381 313 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 LHX1P48742 406 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 LIMK1P53667 647 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 CDH8P55286 799 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 NLRP12P59046 1061 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 MYL7Q01449 175 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 SMARCB1Q12824 385 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 MYO1EQ12965 1108 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 RUNX3Q13761 415 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 SF3A2Q15428 464 aaKnown RBP7.32□□□□□ -1.24
CBX5-204ENST00000550411 NFE2Q16621 373 aaPredicted RBP7.32□□□□□ -1.24
CBX5-204ENST00000550411 DDR2Q16832 855 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 ZNF699Q32M78 642 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 EDRF1Q3B7T1 1238 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 WDR72Q3MJ13 1102 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 MDH1BQ5I0G3 518 aa7.32□□□□□ -1.24
CBX5-204ENST00000550411 CEP135Q66GS9 1140 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms