RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 PPCSQ9HAB8 311 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 UGT1A7Q9HAW7 530 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 UGT1A10Q9HAW8 530 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 UGT1A8Q9HAW9 530 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 XAB2Q9HCS7 855 aaKnown RBP12.59□□□□□ -0.39
VDR-208ENST00000550325 MAN1C1Q9NR34 630 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 CDH22Q9UJ99 828 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 POMPQ9Y244 141 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 GMEB1Q9Y692 573 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 UBE4BO95155 1302 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 UNGP13051 313 aaPredicted RBP12.59□□□□□ -0.39
VDR-208ENST00000550325 SLC15A2Q16348 729 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 PCGF5Q86SE9 256 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 SLC9A9Q8IVB4 645 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 HSPH1Q92598 858 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 C20orf27Q9GZN8 174 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 CAAP1Q9H8G2 361 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 UBAP1Q9NZ09 502 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 IP6K2Q9UHH9 426 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 STT3AP46977 705 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 NFIL3Q16649 462 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 NRF1Q16656 503 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 XKR9Q5GH70 373 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 TFDP3Q5H9I0 405 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 PLA2G4FQ68DD2 849 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 AAGABQ6PD74 315 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 DARS2Q6PI48 645 aaKnown RBP12.59□□□□□ -0.39
VDR-208ENST00000550325 UNC45BQ8IWX7 931 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 ZBTB8BQ8NAP8 495 aaPredicted RBP12.59□□□□□ -0.39
VDR-208ENST00000550325 MBOAT7Q96N66 472 aa12.59□□□□□ -0.39
VDR-208ENST00000550325 HERC5Q9UII4 1024 aaKnown RBP12.59□□□□□ -0.39
VDR-208ENST00000550325 HBS1LQ9Y450 684 aaKnown RBP12.59□□□□□ -0.39
VDR-208ENST00000550325 GNPATO15228 680 aa12.58□□□□□ -0.39
VDR-208ENST00000550325 DCXO43602 365 aa12.58□□□□□ -0.39
VDR-208ENST00000550325 ATP9BO43861 1147 aa12.58□□□□□ -0.39
VDR-208ENST00000550325 MLH1P40692 756 aa12.58□□□□□ -0.39
VDR-208ENST00000550325 NFIAQ12857 509 aa12.58□□□□□ -0.39
VDR-208ENST00000550325 LPIN1Q14693 890 aa12.58□□□□□ -0.39
VDR-208ENST00000550325 RARS2Q5T160 578 aaKnown RBP12.58□□□□□ -0.39
VDR-208ENST00000550325 GAB3Q8WWW8 586 aa12.58□□□□□ -0.39
VDR-208ENST00000550325 LZICQ8WZA0 190 aa12.58□□□□□ -0.39
VDR-208ENST00000550325 SSU72Q9NP77 194 aaKnown RBP12.58□□□□□ -0.39
VDR-208ENST00000550325 AVENQ9NQS1 362 aaPredicted RBP12.58□□□□□ -0.39
VDR-208ENST00000550325 GGA1Q9UJY5 639 aa12.58□□□□□ -0.39
VDR-208ENST00000550325 MYPNQ86TC9 1320 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 E9PBE3 544 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 H7C0C1 242 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 KLHL41O60662 606 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 ETV4P43268 484 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 ATP5OP48047 213 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 HSF5Q4G112 596 aaPredicted RBP12.58□□□□□ -0.4
VDR-208ENST00000550325 LGSNQ5TDP6 509 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 CHSY1Q86X52 802 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 ZFPM1Q8IX07 1006 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 TTC13Q8NBP0 860 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 USP13Q92995 863 aaPredicted RBP12.58□□□□□ -0.4
VDR-208ENST00000550325 CCDC106Q9BWC9 280 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 PARVAQ9NVD7 372 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 SCINQ9Y6U3 715 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 PIK3R2O00459 728 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 XPOTO43592 962 aaKnown RBP12.58□□□□□ -0.4
VDR-208ENST00000550325 CRTAMO95727 393 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 SERPINA6P08185 405 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 SNRPAP09012 282 aaKnown RBP12.58□□□□□ -0.4
VDR-208ENST00000550325 SMIM18P0DKX4 95 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 TTC39BQ5VTQ0 682 aaPredicted RBP12.58□□□□□ -0.4
VDR-208ENST00000550325 CNKSR2Q8WXI2 1034 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 CIDEBQ9UHD4 219 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 DMTF1Q9Y222 760 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 ATAD5Q96QE3 1844 aa12.58□□□□□ -0.4
VDR-208ENST00000550325 A0A1B0GTW7 788 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 TRIM43BA6NCK2 446 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 TNFAIP8O95379 198 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 GTF2H1P32780 548 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 PKNOX1P55347 436 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 EIF3EP60228 445 aaKnown RBP12.57□□□□□ -0.4
VDR-208ENST00000550325 BSPRYQ5W0U4 402 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 CASC4Q6P4E1 433 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 LPCAT2Q7L5N7 544 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 USP37Q86T82 979 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 PPP4R1Q8TF05 950 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 GIPC3Q8TF64 312 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 WDR83Q9BRX9 315 aaKnown RBP12.57□□□□□ -0.4
VDR-208ENST00000550325 CCNL1Q9UK58 526 aaPredicted RBP12.57□□□□□ -0.4
VDR-208ENST00000550325 C10orf71Q711Q0 1435 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 PSMD10O75832 226 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 FAM58BPP0C7Q3 252 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 SERPINB5P36952 375 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 HNRNPDQ14103 355 aaKnown RBP12.57□□□□□ -0.4
VDR-208ENST00000550325 ITPRIPL1Q6GPH6 555 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 DPH6Q7L8W6 267 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 PTAR1Q7Z6K3 402 aaPredicted RBP12.57□□□□□ -0.4
VDR-208ENST00000550325 DNAJB4Q9UDY4 337 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 ZC3H7BQ9UGR2 993 aaKnown RBP12.57□□□□□ -0.4
VDR-208ENST00000550325 CXorf49A8MYA2 514 aaPredicted RBP12.57□□□□□ -0.4
VDR-208ENST00000550325 NEMP1O14524 444 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 ITM2AO43736 263 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 EIF4BP23588 611 aaKnown RBP12.57□□□□□ -0.4
VDR-208ENST00000550325 SLC5A2P31639 672 aa12.57□□□□□ -0.4
VDR-208ENST00000550325 PLOD1Q02809 727 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms