RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 HHLA1C9JL84 531 aa18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 IFNAR2P48551 515 aa18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 SLC8A3P57103 927 aa18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 RUNX3Q13761 415 aa18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 HECTD3Q5T447 861 aa18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 SNX30Q5VWJ9 437 aa18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 TRIM68Q6AZZ1 485 aa18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 DDX42Q86XP3 938 aaKnown RBP eCLIP18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 ZNF687Q8N1G0 1237 aa18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 CPA6Q8N4T0 437 aa18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 UBR7Q8N806 425 aa18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 OSCP1Q8WVF1 389 aa18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 ATOH1Q92858 354 aaPredicted RBP18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 MED15Q96RN5 788 aa18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 DUSP16Q9BY84 665 aa18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 INTS2Q9H0H0 1204 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 TLR8Q9NR97 1041 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 DUS2Q9NX74 493 aaKnown RBP18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 SMPD4Q9NXE4 827 aa18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 SCML2Q9UQR0 700 aa18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 CPQQ9Y646 472 aa18.2■□□□□ 0.5
CHMP1A-208ENST00000550102 LEFTY2O00292 366 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 CYP26A1O43174 497 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 ZDHHC11BP0C7U3 371 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 MBL2P11226 248 aaPredicted RBP18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 ARSAP15289 507 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 CD19P15391 556 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 ACO1P21399 889 aaKnown RBP18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 GCNT1Q02742 428 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 GOLGA7BQ2TAP0 167 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 SGO2Q562F6 1265 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 C1orf210Q8IVY1 113 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 FAM114A1Q8IWE2 563 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 KIAA1958Q8N8K9 716 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 LMO3Q8TAP4 145 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 GPT2Q8TD30 523 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 IER2Q9BTL4 223 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 RNF38Q9H0F5 515 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 FAM86C1Q9NVL1 165 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 SPATA6Q9NWH7 488 aaPredicted RBP18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 CHORDC1Q9UHD1 332 aaPredicted RBP18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 WNT6Q9Y6F9 365 aa18.19■□□□□ 0.5
CHMP1A-208ENST00000550102 VPS13AQ96RL7 3174 aa18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 COCHO43405 550 aa18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 PAEPP09466 180 aa18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 ERCC5P28715 1186 aaPredicted RBP18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 MTIF2P46199 727 aaKnown RBP18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 BCAT1P54687 386 aa18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 LRRC32Q14392 662 aa18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 TXNDC11Q6PKC3 985 aa18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 TMEM270Q6UE05 265 aa18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 CREBRFQ8IUR6 639 aa18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 ANKRD52Q8NB46 1076 aa18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 NACA2Q9H009 215 aa18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 CHRDQ9H2X0 955 aa18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 THAP9Q9H5L6 903 aa18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 CCSER2Q9H7U1 834 aa18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 CFAP97Q9P2B7 532 aa18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 HESX1Q9UBX0 185 aa18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 PCDHB4Q9Y5E5 795 aa18.18■□□□□ 0.5
CHMP1A-208ENST00000550102 TLR5O60602 858 aa18.17■□□□□ 0.5
CHMP1A-208ENST00000550102 NFATC1O95644 943 aa18.17■□□□□ 0.5
CHMP1A-208ENST00000550102 MBD3O95983 291 aa18.17■□□□□ 0.5
CHMP1A-208ENST00000550102 KIF11P52732 1056 aa18.17■□□□□ 0.5
CHMP1A-208ENST00000550102 AMPD2Q01433 879 aa18.17■□□□□ 0.5
CHMP1A-208ENST00000550102 EML3Q32P44 896 aa18.17■□□□□ 0.5
CHMP1A-208ENST00000550102 CCDC186Q7Z3E2 898 aa18.17■□□□□ 0.5
CHMP1A-208ENST00000550102 IRF2BP1Q8IU81 584 aa18.17■□□□□ 0.5
CHMP1A-208ENST00000550102 ARHGEF19Q8IW93 802 aa18.17■□□□□ 0.5
CHMP1A-208ENST00000550102 EHBP1Q8NDI1 1231 aa18.17■□□□□ 0.5
CHMP1A-208ENST00000550102 KAT5Q92993 513 aa18.17■□□□□ 0.5
CHMP1A-208ENST00000550102 TSPAN16Q9UKR8 245 aa18.17■□□□□ 0.5
CHMP1A-208ENST00000550102 KIAA1257Q9ULG3 409 aa18.17■□□□□ 0.5
CHMP1A-208ENST00000550102 MYOFQ9NZM1 2061 aa18.17■□□□□ 0.5
CHMP1A-208ENST00000550102 OTOL1A6NHN0 477 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 O00370 1275 aa18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 SLC9A3R1O14745 358 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 LAMTOR5O43504 91 aa18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 VDRP11473 427 aa18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 ZXDBP98169 803 aa18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 BST2Q10589 180 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 FZD5Q13467 585 aa18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 PON2Q15165 354 aa18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 CT47A1Q5JQC4 288 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 DGKKQ5KSL6 1271 aa18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 RBM43Q6ZSC3 357 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 RRAGAQ7L523 313 aa18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 TTC30AQ86WT1 665 aa18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 RBBP8NLQ8NC74 664 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 ZFRQ96KR1 1074 aaKnown RBP18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 ECT2Q9H8V3 914 aa18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 CYLDQ9NQC7 956 aa18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 ZFHX2Q9C0A1 2572 aaPredicted RBP18.16■□□□□ 0.5
CHMP1A-208ENST00000550102 WDR87Q6ZQQ6 2873 aa18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 GTPBP10A4D1E9 387 aaKnown RBP18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 XPO1O14980 1071 aaKnown RBP18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 SETSIPP0DME0 302 aa18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 CHRNB1P11230 501 aa18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 PGFP49763 221 aa18.15■□□□□ 0.5
CHMP1A-208ENST00000550102 PSEN1P49768 467 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms