RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 CAPN7Q9Y6W3 813 aa9.34□□□□□ -0.91
TMEM116-209ENST00000550020 CLUHO75153 1309 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 ZNF236Q9UL36 1845 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 ZNFX1Q9P2E3 1918 aaKnown RBP9.33□□□□□ -0.92
TMEM116-209ENST00000550020 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.33□□□□□ -0.92
TMEM116-209ENST00000550020 BCLAF3A2AJT9 711 aaKnown RBP9.33□□□□□ -0.92
TMEM116-209ENST00000550020 CFAP73A6NFT4 308 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 MANSC4A6NHS7 340 aaPredicted RBP9.33□□□□□ -0.92
TMEM116-209ENST00000550020 KPNA7A9QM74 516 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 TCP11X1B4DZS4 312 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 POC1B-GALNT4F8VUJ3 575 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 GPR32O75388 356 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 CSDE1O75534 798 aaKnown RBP9.33□□□□□ -0.92
TMEM116-209ENST00000550020 ZBED1O96006 694 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 ZSCAN5DPP0CG00 497 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 ALDH3A1P30838 453 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 HOXA11P31270 313 aaPredicted RBP9.33□□□□□ -0.92
TMEM116-209ENST00000550020 GNL1P36915 607 aaPredicted RBP9.33□□□□□ -0.92
TMEM116-209ENST00000550020 MSH2P43246 934 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 PSEN2P49810 448 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 BASP1P80723 227 aaKnown RBP9.33□□□□□ -0.92
TMEM116-209ENST00000550020 ORC1Q13415 861 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 DPYSL3Q14195 570 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 GPR162Q16538 588 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 QPCTQ16769 361 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 CCDC14Q49A88 953 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 PKDCCQ504Y2 493 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 EFHC2Q5JST6 749 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 TMEM63BQ5T3F8 832 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 C9orf57Q5W0N0 161 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 MAP1SQ66K74 1059 aaPredicted RBP9.33□□□□□ -0.92
TMEM116-209ENST00000550020 OLFML2BQ68BL8 750 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 NUGGCQ68CJ6 796 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 SCARA3Q6AZY7 606 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 TXNRD3NBQ6F5E7 133 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 TAF2Q6P1X5 1199 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 SCYL2Q6P3W7 929 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 OLFML1Q6UWY5 402 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 ALKAL1Q6UXT8 129 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 RGS9BPQ6ZS82 235 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 SLC26A9Q7LBE3 791 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 STRADAQ7RTN6 431 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 SPATA21Q7Z572 469 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 ACOT1Q86TX2 421 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 RSPH3Q86UC2 560 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 TLK2Q86UE8 772 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 TOP6BLQ8N6T0 577 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 ARFGAP1Q8N6T3 406 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 FAM71DQ8N9W8 422 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 FAM172AQ8WUF8 416 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 SLC35F5Q8WV83 523 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 SOCS4Q8WXH5 440 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 CPT1BQ92523 772 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 CCT6BQ92526 530 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 MAML1Q92585 1016 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 ACSF2Q96CM8 615 aaPredicted RBP9.33□□□□□ -0.92
TMEM116-209ENST00000550020 ZBTB10Q96DT7 871 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 RTP4Q96DX8 246 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 TGS1Q96RS0 853 aaKnown RBP9.33□□□□□ -0.92
TMEM116-209ENST00000550020 ELAC2Q9BQ52 826 aaKnown RBP9.33□□□□□ -0.92
TMEM116-209ENST00000550020 LRRC4CQ9HCJ2 640 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 NGRNQ9NPE2 291 aaKnown RBP9.33□□□□□ -0.92
TMEM116-209ENST00000550020 HAUS2Q9NVX0 235 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 EURLQ9NYK6 297 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 KLHL14Q9P2G3 628 aa9.33□□□□□ -0.92
TMEM116-209ENST00000550020 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.33□□□□□ -0.92
TMEM116-209ENST00000550020 POLR2AP24928 1970 aaKnown RBP9.32□□□□□ -0.92
TMEM116-209ENST00000550020 C17orf102A2RUQ5 167 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 HACD1B0YJ81 288 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 HAS3O00219 553 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 PIRO00625 290 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 TRDMT1O14717 391 aaKnown RBP9.32□□□□□ -0.92
TMEM116-209ENST00000550020 TM9SF1O15321 606 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 SNX3O60493 162 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 DNAJC8O75937 253 aaPredicted RBP9.32□□□□□ -0.92
TMEM116-209ENST00000550020 RECQL4O94761 1208 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 CA4P22748 312 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 WARSP23381 471 aaKnown RBP9.32□□□□□ -0.92
TMEM116-209ENST00000550020 ARL4AP40617 200 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 RGS2P41220 211 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 RPL34P49207 117 aaKnown RBP9.32□□□□□ -0.92
TMEM116-209ENST00000550020 AIF1P55008 147 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 SNX17Q15036 470 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 SETDB1Q15047 1291 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 ANKRD20A8PQ5CZ79 823 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 XKR4Q5GH76 650 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 MORN1Q5T089 497 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 PPP1R26Q5T8A7 1209 aaPredicted RBP9.32□□□□□ -0.92
TMEM116-209ENST00000550020 HHATQ5VTY9 493 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 FYB2Q5VWT5 728 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 SLC9A4Q6AI14 798 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 C3orf62Q6ZUJ4 267 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 PDZD4Q76G19 769 aaPredicted RBP9.32□□□□□ -0.92
TMEM116-209ENST00000550020 TRPM8Q7Z2W7 1104 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 C7orf31Q8N865 590 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 MCUQ8NE86 351 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 MGARPQ8TDB4 240 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 FAF2Q96CS3 445 aa9.32□□□□□ -0.92
TMEM116-209ENST00000550020 MRPL45Q9BRJ2 306 aaKnown RBP9.32□□□□□ -0.92
TMEM116-209ENST00000550020 PCDH18Q9HCL0 1135 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms