RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 CPA6Q8N4T0 437 aa16.88■□□□□ 0.29
COX6A1-203ENST00000550009 TATDN2Q93075 761 aa16.88■□□□□ 0.29
COX6A1-203ENST00000550009 ATP2A3Q93084 1043 aa16.88■□□□□ 0.29
COX6A1-203ENST00000550009 NUDT5Q9UKK9 219 aa16.88■□□□□ 0.29
COX6A1-203ENST00000550009 SPTBN2O15020 2390 aa16.88■□□□□ 0.29
COX6A1-203ENST00000550009 K7EQS6 105 aa16.87■□□□□ 0.29
COX6A1-203ENST00000550009 IKBKBO14920 756 aa16.87■□□□□ 0.29
COX6A1-203ENST00000550009 MDM4O15151 490 aa16.87■□□□□ 0.29
COX6A1-203ENST00000550009 PAPSS2O95340 614 aaPredicted RBP16.87■□□□□ 0.29
COX6A1-203ENST00000550009 IRF1P10914 325 aa16.87■□□□□ 0.29
COX6A1-203ENST00000550009 CHRM1P11229 460 aaPredicted RBP16.87■□□□□ 0.29
COX6A1-203ENST00000550009 TCF3P15923 654 aa16.87■□□□□ 0.29
COX6A1-203ENST00000550009 SIM2Q14190 667 aaPredicted RBP16.87■□□□□ 0.29
COX6A1-203ENST00000550009 RSPO4Q2I0M5 234 aaPredicted RBP16.87■□□□□ 0.29
COX6A1-203ENST00000550009 ZNF394Q53GI3 561 aa16.87■□□□□ 0.29
COX6A1-203ENST00000550009 C1orf228Q6PIY5 440 aa16.87■□□□□ 0.29
COX6A1-203ENST00000550009 CRYBG2Q8N1P7 616 aa16.87■□□□□ 0.29
COX6A1-203ENST00000550009 CD101Q93033 1021 aa16.87■□□□□ 0.29
COX6A1-203ENST00000550009 SMARCD1Q96GM5 515 aa16.87■□□□□ 0.29
COX6A1-203ENST00000550009 IER2Q9BTL4 223 aa16.87■□□□□ 0.29
COX6A1-203ENST00000550009 FAM126AQ9BYI3 521 aaPredicted RBP16.87■□□□□ 0.29
COX6A1-203ENST00000550009 NMUR1Q9HB89 426 aa16.87■□□□□ 0.29
COX6A1-203ENST00000550009 DMAP1Q9NPF5 467 aaPredicted RBP16.87■□□□□ 0.29
COX6A1-203ENST00000550009 IL37Q9NZH6 218 aa16.87■□□□□ 0.29
COX6A1-203ENST00000550009 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.87■□□□□ 0.29
COX6A1-203ENST00000550009 CACNA1AO00555 2505 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 TRIM24O15164 1050 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 CYP26A1O43174 497 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 HNRNPLP14866 589 aaKnown RBP eCLIP16.86■□□□□ 0.29
COX6A1-203ENST00000550009 CD44P16070 742 aaKnown RBP16.86■□□□□ 0.29
COX6A1-203ENST00000550009 PSMC2P35998 433 aaKnown RBP16.86■□□□□ 0.29
COX6A1-203ENST00000550009 NRLP54845 237 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 DHCR24Q15392 516 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 CBWD6Q4V339 395 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 CBWD3Q5JTY5 395 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 CBWD5Q5RIA9 395 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 EMC10Q5UCC4 262 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 ANKRD40Q6AI12 368 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 RHBDF2Q6PJF5 856 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 CLEC20AQ6ZU45 233 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 LONP2Q86WA8 852 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 ADGRG2Q8IZP9 1017 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 FAM160A2Q8N612 972 aaPredicted RBP16.86■□□□□ 0.29
COX6A1-203ENST00000550009 P2RY11Q96G91 374 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 SLITRK1Q96PX8 696 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 CSNK1G1Q9HCP0 422 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 INVSQ9Y283 1065 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 PCDHA5Q9Y5H7 936 aa16.86■□□□□ 0.29
COX6A1-203ENST00000550009 GON4LQ3T8J9 2241 aa16.85■□□□□ 0.29
COX6A1-203ENST00000550009 TNRC6BQ9UPQ9 1833 aaKnown RBP16.85■□□□□ 0.29
COX6A1-203ENST00000550009 MED19A0JLT2 244 aaPredicted RBP16.85■□□□□ 0.29
COX6A1-203ENST00000550009 DCLK1O15075 740 aa16.85■□□□□ 0.29
COX6A1-203ENST00000550009 MAPK13O15264 365 aa16.85■□□□□ 0.29
COX6A1-203ENST00000550009 GADD45BO75293 160 aaPredicted RBP16.85■□□□□ 0.29
COX6A1-203ENST00000550009 ZDHHC11BP0C7U3 371 aa16.85■□□□□ 0.29
COX6A1-203ENST00000550009 INCA1Q0VD86 236 aa16.85■□□□□ 0.29
COX6A1-203ENST00000550009 C2orf27AQ580R0 203 aa16.85■□□□□ 0.29
COX6A1-203ENST00000550009 PPP1R26Q5T8A7 1209 aaPredicted RBP16.85■□□□□ 0.29
COX6A1-203ENST00000550009 INTS8Q75QN2 995 aaKnown RBP16.85■□□□□ 0.29
COX6A1-203ENST00000550009 KBTBD6Q86V97 674 aa16.85■□□□□ 0.29
COX6A1-203ENST00000550009 WDR5BQ86VZ2 330 aa16.85■□□□□ 0.29
COX6A1-203ENST00000550009 CCDC33Q8N5R6 958 aa16.85■□□□□ 0.29
COX6A1-203ENST00000550009 TNIP3Q96KP6 325 aa16.85■□□□□ 0.29
COX6A1-203ENST00000550009 CEP295NLQ96MC4 621 aa16.85■□□□□ 0.29
COX6A1-203ENST00000550009 SMOC1Q9H4F8 434 aa16.85■□□□□ 0.29
COX6A1-203ENST00000550009 TMEM8AQ9HCN3 771 aa16.85■□□□□ 0.29
COX6A1-203ENST00000550009 USP18Q9UMW8 372 aa16.85■□□□□ 0.29
COX6A1-203ENST00000550009 ATP6V1DQ9Y5K8 247 aa16.85■□□□□ 0.29
COX6A1-203ENST00000550009 ADAMTS9Q9P2N4 1935 aa16.85■□□□□ 0.29
COX6A1-203ENST00000550009 FAM92AA1XBS5 289 aa16.84■□□□□ 0.29
COX6A1-203ENST00000550009 GDF9O60383 454 aa16.84■□□□□ 0.29
COX6A1-203ENST00000550009 CILPO75339 1184 aa16.84■□□□□ 0.29
COX6A1-203ENST00000550009 RTN3O95197 1032 aaPredicted RBP16.84■□□□□ 0.29
COX6A1-203ENST00000550009 KRT13P13646 458 aa16.84■□□□□ 0.29
COX6A1-203ENST00000550009 DRD1P21728 446 aa16.84■□□□□ 0.29
COX6A1-203ENST00000550009 KDSRQ06136 332 aa16.84■□□□□ 0.29
COX6A1-203ENST00000550009 PPP2R5DQ14738 602 aa16.84■□□□□ 0.29
COX6A1-203ENST00000550009 LY6G5CQ5SRR4 150 aa16.84■□□□□ 0.29
COX6A1-203ENST00000550009 BBS7Q8IWZ6 715 aa16.84■□□□□ 0.29
COX6A1-203ENST00000550009 SYNPOQ8N3V7 929 aa16.84■□□□□ 0.29
COX6A1-203ENST00000550009 NAT16Q8N8M0 369 aa16.84■□□□□ 0.29
COX6A1-203ENST00000550009 TAF4BQ92750 862 aa16.84■□□□□ 0.29
COX6A1-203ENST00000550009 CCDC47Q96A33 483 aaKnown RBP16.84■□□□□ 0.29
COX6A1-203ENST00000550009 ERLEC1Q96DZ1 483 aa16.84■□□□□ 0.29
COX6A1-203ENST00000550009 CYFIP2Q96F07 1278 aa16.84■□□□□ 0.29
COX6A1-203ENST00000550009 NIF3L1Q9GZT8 377 aa16.84■□□□□ 0.29
COX6A1-203ENST00000550009 A0A1W2PQH9 124 aa16.83■□□□□ 0.28
COX6A1-203ENST00000550009 AXIN1O15169 862 aa16.83■□□□□ 0.28
COX6A1-203ENST00000550009 ATP8B3O60423 1300 aa16.83■□□□□ 0.28
COX6A1-203ENST00000550009 GREM1O60565 184 aa16.83■□□□□ 0.28
COX6A1-203ENST00000550009 NFATC1O95644 943 aa16.83■□□□□ 0.28
COX6A1-203ENST00000550009 CALCAP01258 141 aa16.83■□□□□ 0.28
COX6A1-203ENST00000550009 BMP6P22004 513 aa16.83■□□□□ 0.28
COX6A1-203ENST00000550009 PI4KAP42356 2102 aa16.83■□□□□ 0.28
COX6A1-203ENST00000550009 MCCD1P59942 119 aaPredicted RBP16.83■□□□□ 0.28
COX6A1-203ENST00000550009 DMC1Q14565 340 aa16.83■□□□□ 0.28
COX6A1-203ENST00000550009 HECTD3Q5T447 861 aa16.83■□□□□ 0.28
COX6A1-203ENST00000550009 ZNF658Q5TYW1 1059 aaPredicted RBP16.83■□□□□ 0.28
COX6A1-203ENST00000550009 SNX30Q5VWJ9 437 aa16.83■□□□□ 0.28
COX6A1-203ENST00000550009 UNC93AQ86WB7 457 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms