RNA–Protein interactions for RNA: ENST00000549993.1

AC138331.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC138331.1, Length 376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138331.1-201ENST00000549993 ZNF840PA6NDX5 716 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 TRIM66O15016 1216 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 PAPSS1O43252 624 aaPredicted RBP10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 CDKL5O76039 1030 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 ACTN2P35609 894 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 CSNK1EP49674 416 aaKnown RBP10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 TAF6P49848 677 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 AFF3P51826 1226 aaKnown RBP10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 CCDC173Q0VFZ6 552 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 PDIA5Q14554 519 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 SF3A1Q15459 793 aaKnown RBP10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 C10orf76Q5T2E6 689 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 DCAF12L1Q5VU92 463 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 EGFLAMQ63HQ2 1017 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 DIEXFQ68CQ4 756 aaKnown RBP10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 SDE2Q6IQ49 451 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 C1orf186Q6ZWK4 172 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 CHPFQ8IZ52 775 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 CACTIN-AS1Q8N1I8 211 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 NAT16Q8N8M0 369 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 KCNN1Q92952 543 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 OTUB2Q96DC9 234 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 FUBP3Q96I24 572 aaKnown RBP eCLIP10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 CEP295NLQ96MC4 621 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 DUSP9Q99956 384 aaKnown RBP10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 GPR174Q9BXC1 333 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 TRPM5Q9NZQ8 1165 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 CFAP97Q9P2B7 532 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 KIAA1024Q9UPX6 916 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 CPQQ9Y646 472 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 TLN1Q9Y490 2541 aaKnown RBP10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 ADAMTS9Q9P2N4 1935 aa10.05□□□□□ -0.8
AC138331.1-201ENST00000549993 PLXND1Q9Y4D7 1925 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 E2F8A0AVK6 867 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 SFI1A8K8P3 1242 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 KPNA7A9QM74 516 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 GFRA2O00451 464 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 SCAMP3O14828 347 aaKnown RBP10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 TRIM24O15164 1050 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 OGTO15294 1046 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 BRINP1O60477 761 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 IGLV3-19P01714 112 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 ADSSP30520 456 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 MAGEA11P43364 429 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 PPP3CCP48454 512 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 UCNP55089 124 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 CLDN6P56747 220 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 STK3Q13188 491 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 TMEM132DQ14C87 1099 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 TBC1D25Q3MII6 688 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 BTBD8Q5XKL5 378 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 HAUS3Q68CZ6 603 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 RINT1Q6NUQ1 792 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 USP49Q70CQ1 688 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 RUFY3Q7L099 469 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 IGSF8Q969P0 613 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 SPATA17Q96L03 361 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 ARID3AQ99856 593 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 LARP6Q9BRS8 491 aaKnown RBP10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 RUSC1Q9BVN2 902 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 TTLL2Q9BWV7 592 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 ZSWIM6Q9HCJ5 1215 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 OSGEPQ9NPF4 335 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 NXF1Q9UBU9 619 aaKnown RBP10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 FTSJ1Q9UET6 329 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 EIF2B4Q9UI10 523 aaKnown RBP10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 CPSF3Q9UKF6 684 aaKnown RBP10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 GTF3C4Q9UKN8 822 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 C2CD2Q9Y426 696 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 SNX11Q9Y5W9 270 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 KIAA1549LQ6ZVL6 1849 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 TRIP11Q15643 1979 aa10.04□□□□□ -0.8
AC138331.1-201ENST00000549993 AHCTF1Q8WYP5 2266 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 A0A0B4J269 797 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 KCNJ18B7U540 433 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 OAS1P00973 400 aaKnown RBP10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 PLS3P13797 630 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 OXTRP30559 389 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 CCT6AP40227 531 aaKnown RBP10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 MATR3P43243 847 aaKnown RBP eCLIP10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 SMTNP53814 917 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 TMPRSS3P57727 454 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 USP46P62068 366 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 BMP2KLQ5H9B9 411 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 INTS6LQ5JSJ4 861 aaKnown RBP10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 ARHGAP40Q5TG30 622 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 FBXL19Q6PCT2 694 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 DDX42Q86XP3 938 aaKnown RBP eCLIP10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 TMEM25Q86YD3 366 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 PDCL2Q8N4E4 241 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 HIC2Q96JB3 615 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 TIPINQ9BVW5 301 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 MKRN2Q9H000 416 aaKnown RBP10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 PCED1AQ9H1Q7 454 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 ASB7Q9H672 318 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 CPNE5Q9HCH3 593 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 BRMS1Q9HCU9 246 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 DDX19AQ9NUU7 478 aaKnown RBP10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 SMPD4Q9NXE4 827 aa10.03□□□□□ -0.8
AC138331.1-201ENST00000549993 DPP3Q9NY33 737 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms