RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 MAP7D3Q8IWC1 876 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 PPIL6Q8IXY8 311 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 ADGRF2Q8IZF7 708 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 PQLC3Q8N755 202 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 C12orf29Q8N999 325 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 OR2W6PQ8NHA6 318 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 UBA3Q8TBC4 463 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 IRGQQ8WZA9 623 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 PPP1R16BQ96T49 567 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 TRIM31Q9BZY9 425 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 TRIM6Q9C030 488 aaPredicted RBP10.44□□□□□ -0.74
RAB5B-206ENST00000549505 USP29Q9HBJ7 922 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 LRRC4CQ9HCJ2 640 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 PCDH18Q9HCL0 1135 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 PTPN22Q9Y2R2 807 aa10.44□□□□□ -0.74
RAB5B-206ENST00000549505 TMEM189-UBE2V1I3L0A0 370 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 PDGFRAP16234 1089 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 HCAR3P49019 387 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 FAM189BP81408 668 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 CACNB2Q08289 660 aaPredicted RBP10.43□□□□□ -0.74
RAB5B-206ENST00000549505 EIF4EBP2Q13542 120 aaPredicted RBP10.43□□□□□ -0.74
RAB5B-206ENST00000549505 OTUD1Q5VV17 481 aaPredicted RBP10.43□□□□□ -0.74
RAB5B-206ENST00000549505 FAM171BQ6P995 826 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 FUKQ8N0W3 1084 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 SH2D3CQ8N5H7 860 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 GPATCH11Q8N954 259 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 B3GALNT2Q8NCR0 500 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 ACTL9Q8TC94 416 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 DPEP3Q9H4B8 488 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 SPC25Q9HBM1 224 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 MTMR10Q9NXD2 777 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 RRN3Q9NYV6 651 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 ST3GAL5Q9UNP4 418 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 PTPRDP23468 1912 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 A0A0U1RQF3 1178 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 GOLGA8SH3BPF8 625 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 M0QZ92 97 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 CHADO15335 359 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 RARBP10826 455 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 COL6A1P12109 1028 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 AKAP5P24588 427 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 L1CAMP32004 1257 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 MATKP42679 507 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 GNGT1P63211 74 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 OTUD4Q01804 1114 aaKnown RBP10.43□□□□□ -0.74
RAB5B-206ENST00000549505 SNX1Q13596 522 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 UPP1Q16831 310 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 P3H1Q32P28 736 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 SLC25A52Q3SY17 297 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 EFHC2Q5JST6 749 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 PLD5Q8N7P1 536 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 PCSK9Q8NBP7 692 aaKnown RBP10.43□□□□□ -0.74
RAB5B-206ENST00000549505 ATXN2LQ8WWM7 1075 aaKnown RBP10.43□□□□□ -0.74
RAB5B-206ENST00000549505 WNT8BQ93098 351 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 NTAN1Q96AB6 310 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 PIWIL1Q96J94 861 aaKnown RBP10.43□□□□□ -0.74
RAB5B-206ENST00000549505 NPY6RQ99463 290 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 CWC15Q9P013 229 aaKnown RBP10.43□□□□□ -0.74
RAB5B-206ENST00000549505 CDH9Q9ULB4 789 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 GABRQQ9UN88 632 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 HES2Q9Y543 173 aa10.43□□□□□ -0.74
RAB5B-206ENST00000549505 A8MXQ7 604 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 HACD1B0YJ81 288 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 HHLA1C9JL84 531 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 PI4K2BG5E9Z4 385 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 CST8O60676 142 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 HUS1O60921 280 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 FAM107AO95990 144 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 GSTA2P09210 222 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 DESP17661 470 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 MAGEA3P43357 314 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 PSMC4P43686 418 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 TMEM62Q0P6H9 643 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 KCNJ11Q14654 390 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 KRT71Q3SY84 523 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 ANKRD20A8PQ5CZ79 823 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 AGMOQ6ZNB7 445 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 CYS1Q717R9 158 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 KLHDC8BQ8IXV7 354 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 EMC1Q8N766 993 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 KCTD6Q8NC69 237 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 RSPH1Q8WYR4 309 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 MAML1Q92585 1016 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 OLFM3Q96PB7 478 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 TSPYL2Q9H2G4 693 aaPredicted RBP10.42□□□□□ -0.74
RAB5B-206ENST00000549505 SNX25Q9H3E2 840 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 SYNCQ9H7C4 482 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 SLC24A2Q9UI40 661 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 TRIP12Q14669 1992 aaPredicted RBP10.42□□□□□ -0.74
RAB5B-206ENST00000549505 PLXNA3P51805 1871 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 TMEM88BA6NKF7 163 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 E7EVH7 732 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 TULP2O00295 520 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 RASGRF2O14827 1237 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 PTPN1P18031 435 aaKnown RBP10.42□□□□□ -0.74
RAB5B-206ENST00000549505 GCAP28676 217 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 SDC4P31431 198 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 HNRNPH2P55795 449 aaKnown RBP10.42□□□□□ -0.74
RAB5B-206ENST00000549505 OR6B2Q6IFH4 312 aa10.42□□□□□ -0.74
RAB5B-206ENST00000549505 BHLHA9Q7RTU4 235 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms