RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 DNAJC24Q6P3W2 148 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 OLFML1Q6UWY5 402 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 LIAT1Q6ZQX7 453 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 ANKS3Q6ZW76 656 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 SPRED2Q7Z698 418 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 KIF18AQ8NI77 898 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 JOSD2Q8TAC2 188 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 FEZF2Q8TBJ5 459 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 PHOSPHO2Q8TCD6 241 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 IPO4Q8TEX9 1081 aaKnown RBP8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 PIK3R5Q8WYR1 880 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 CLP1Q92989 425 aaKnown RBP8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 SMARCD1Q96GM5 515 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 MCEEQ96PE7 176 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 ALS2CR12Q96Q35 445 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 KCNK16Q96T55 309 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 RAD9AQ99638 391 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 DNAI2Q9GZS0 605 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 CSNK1G1Q9HCP0 422 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 CYLDQ9NQC7 956 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 ST7Q9NRC1 585 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 METTL5Q9NRN9 209 aaKnown RBP8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 CHST7Q9NS84 486 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 SPG21Q9NZD8 308 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 MTRRQ9UBK8 725 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 STRIP2Q9ULQ0 834 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 INSL6Q9Y581 213 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 SCINQ9Y6U3 715 aa8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 MTCL1Q9Y4B5 1905 aaKnown RBP8.52□□□□□ -1.05
DEPDC4-207ENST00000549249 MTMR11A4FU01 709 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 CTAGE9A4FU28 777 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 SIGLEC16A6NMB1 481 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 GRXCR1A8MXD5 290 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 H7C4K7 107 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 DDX3YO15523 660 aaKnown RBP8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 LCP1P13796 627 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 MYOGP15173 224 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 RPL17P18621 184 aaKnown RBP8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 CYP2F1P24903 491 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 ACADSBP45954 432 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 GPR15P49685 360 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 DSG1Q02413 1049 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 ADIGQ0VDE8 80 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 SHHQ15465 462 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 TAF5Q15542 800 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 MAPRE1Q15691 268 aaKnown RBP8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 PSMD5Q16401 504 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 IFI16Q16666 785 aaKnown RBP8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 USP41Q3LFD5 358 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 RAB41Q5JT25 222 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 DAB2IPQ5VWQ8 1189 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 PAPD7Q5XG87 772 aaKnown RBP8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 OR6B2Q6IFH4 312 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 Q7L0L9 218 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 BHLHA9Q7RTU4 235 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 DAAM2Q86T65 1068 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 DDX53Q86TM3 631 aaKnown RBP8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 SPATA2LQ8IUW3 424 aaPredicted RBP8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 DCP1BQ8IZD4 617 aaKnown RBP8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 FIBCD1Q8N539 461 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 MSANTD4Q8NCY6 345 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 RIN2Q8WYP3 895 aaPredicted RBP8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 KCTD13Q8WZ19 329 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 NDRG1Q92597 394 aaKnown RBP8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 CD101Q93033 1021 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 TMEM169Q96HH4 297 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 HSFY1Q96LI6 401 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 PGLYRP2Q96PD5 576 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 USB1Q9BQ65 265 aaKnown RBP8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 SELENOOQ9BVL4 669 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 CRISPLD1Q9H336 500 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 MRPL47Q9HD33 250 aaKnown RBP8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 PARVAQ9NVD7 372 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 ABI2Q9NYB9 513 aaPredicted RBP8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 WDR35Q9P2L0 1181 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 TMEM59LQ9UK28 342 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 FCF1Q9Y324 198 aaKnown RBP8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 JRKLQ9Y4A0 524 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 ALG6Q9Y672 507 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 OBSL1O75147 1896 aa8.51□□□□□ -1.05
DEPDC4-207ENST00000549249 ANAPC1Q9H1A4 1944 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 WDR27A2RRH5 827 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 LINC01553A4QN01 128 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 FAM187AA6NFU0 413 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 C2CD4BA6NLJ0 364 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 F8VP50 259 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 C2CD2LO14523 706 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 TNFRSF10BO14763 440 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 SRGAP2O75044 1071 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 GRAP2O75791 330 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 FGF18O76093 207 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 URI1O94763 535 aaPredicted RBP8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 PROSCO94903 275 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 KRT3P12035 628 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 CPB1P15086 417 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 COMTP21964 271 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 RFC1P35251 1148 aaPredicted RBP8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 PPM1AP35813 382 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 FLT3P36888 993 aa8.5□□□□□ -1.05
DEPDC4-207ENST00000549249 SCNN1AP37088 669 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms