RNA–Protein interactions for RNA: ENST00000549220.5

EFCAB2-215, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 4

Gene EFCAB2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-215ENST00000549220 RNF141Q8WVD5 230 aa6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 C18orf25Q96B23 403 aaPredicted RBP6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 CCDC34Q96HJ3 373 aa6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 B3GALT6Q96L58 329 aa6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 DIRC2Q96SL1 478 aa6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 FIZ1Q96SL8 496 aa6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 PAAF1Q9BRP4 392 aa6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 FAM213AQ9BRX8 229 aa6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 NTPCRQ9BSD7 190 aaKnown RBP6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 NSUN3Q9H649 340 aaKnown RBP6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 RPF1Q9H9Y2 349 aaKnown RBP6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 UBN1Q9NPG3 1134 aa6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 TOPORSQ9NS56 1045 aaPredicted RBP6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 SPG21Q9NZD8 308 aa6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 USP25Q9UHP3 1055 aa6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 AGO2Q9UKV8 859 aaKnown RBP6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 EXOC7Q9UPT5 735 aa6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 FAN1Q9Y2M0 1017 aa6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 GIT1Q9Y2X7 761 aa6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 MTCH2Q9Y6C9 303 aa6.37□□□□□ -1.39
EFCAB2-215ENST00000549220 DENND4AQ7Z401 1863 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 ZMYM2Q9UBW7 1377 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 FRMD3A2A2Y4 597 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 LACTBL1A8MY62 500 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 I3L4J1 428 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 ABLIM1O14639 778 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 PTGESO14684 152 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 PER2O15055 1255 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 OGTO15294 1046 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 KLRC4O43908 158 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 TADA2AO75478 443 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 ALDH2P05091 517 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 RB1P06400 928 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 GALTP07902 379 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 TCF3P15923 654 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 PROZP22891 400 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 GTF2F1P35269 517 aaKnown RBP eCLIP6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 PPM1AP35813 382 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 HK2P52789 917 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 TEKQ02763 1124 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 KRT17Q04695 432 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 MCL1Q07820 350 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 TUSC3Q13454 348 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 POSTNQ15063 836 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 CLUL1Q15846 466 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 TCEAL5Q5H9L2 206 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 LMBRD2Q68DH5 695 aaPredicted RBP6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 ADGRD2Q7Z7M1 963 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 CEP57Q86XR8 500 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 COLGALT2Q8IYK4 626 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 VPS52Q8N1B4 723 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 SLC39A11Q8N1S5 342 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 BAHD1Q8TBE0 780 aaPredicted RBP6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 SPPL3Q8TCT6 385 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 SMARCE1Q969G3 411 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 HVCN1Q96D96 273 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 MRPL38Q96DV4 380 aaKnown RBP6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 IGSF21Q96ID5 467 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 SNX27Q96L92 541 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 TMEM74Q96NL1 305 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 GBP4Q96PP9 640 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 TCF25Q9BQ70 676 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 CBWD1Q9BRT8 395 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 APOL5Q9BWW9 433 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 RNF32Q9H0A6 362 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 PTPRHQ9HD43 1115 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 TLR9Q9NR96 1032 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 OLFML3Q9NRN5 406 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 REV1Q9UBZ9 1251 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 TUBGCP4Q9UGJ1 667 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 PUF60Q9UHX1 559 aaKnown RBP6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 STXBP5LQ9Y2K9 1186 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 DOCK8Q8NF50 2099 aa6.36□□□□□ -1.39
EFCAB2-215ENST00000549220 ANAPC1Q9H1A4 1944 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 A0A0B4J269 797 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 SMIM28A0A1B0GU29 152 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 PVALEFA0A1B0GWK0 134 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 HIDE1A8MVS5 230 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 C5orf67F2Z3F1 127 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 LINC01565O15544 149 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 CXCL14O95715 111 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 CLTAP09496 248 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 VAMP1P23763 118 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 ABCD1P33897 745 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 BRCC3P46736 316 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 NRIP1P48552 1158 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 CLCNKBP51801 687 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 UBE2HP62256 183 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 RBM10P98175 930 aaKnown RBP6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 TFAMQ00059 246 aaKnown RBP6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 STK4Q13043 487 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 SNW1Q13573 536 aaKnown RBP6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 ALCAMQ13740 583 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 HSP90AA2PQ14568 343 aaPredicted RBP6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 NR0B2Q15466 257 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 SLC10A6Q3KNW5 377 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 JADE1Q6IE81 842 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 SLFN12LQ6IEE8 588 aa6.35□□□□□ -1.39
EFCAB2-215ENST00000549220 KIAA1841Q6NSI8 718 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms