RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 BDNFP23560 247 aa14.44□□□□□ -0.1
CDX2-202ENST00000548877 LMO2P25791 158 aa14.44□□□□□ -0.1
CDX2-202ENST00000548877 DDIT3P35638 169 aa14.44□□□□□ -0.1
CDX2-202ENST00000548877 TRIP6Q15654 476 aaKnown RBP14.44□□□□□ -0.1
CDX2-202ENST00000548877 PREPLQ4J6C6 727 aaPredicted RBP14.44□□□□□ -0.1
CDX2-202ENST00000548877 LARP4BQ92615 738 aaKnown RBP14.44□□□□□ -0.1
CDX2-202ENST00000548877 MYLPFQ96A32 169 aa14.44□□□□□ -0.1
CDX2-202ENST00000548877 ZNF419Q96HQ0 510 aaPredicted RBP14.44□□□□□ -0.1
CDX2-202ENST00000548877 ZHX3Q9H4I2 956 aa14.44□□□□□ -0.1
CDX2-202ENST00000548877 DKK4Q9UBT3 224 aa14.44□□□□□ -0.1
CDX2-202ENST00000548877 HCN2Q9UL51 889 aa14.44□□□□□ -0.1
CDX2-202ENST00000548877 CIZ1Q9ULV3 898 aaPredicted RBP14.44□□□□□ -0.1
CDX2-202ENST00000548877 EXOC7Q9UPT5 735 aa14.44□□□□□ -0.1
CDX2-202ENST00000548877 IGHV1OR15-9A0A0B4J2B8 117 aa14.43□□□□□ -0.1
CDX2-202ENST00000548877 A0A1W2PQF6 199 aa14.43□□□□□ -0.1
CDX2-202ENST00000548877 ZNF217O75362 1048 aa14.43□□□□□ -0.1
CDX2-202ENST00000548877 FAM163BP0C2L3 166 aa14.43□□□□□ -0.1
CDX2-202ENST00000548877 WARSP23381 471 aaKnown RBP14.43□□□□□ -0.1
CDX2-202ENST00000548877 LONP1P36776 959 aaKnown RBP14.43□□□□□ -0.1
CDX2-202ENST00000548877 GRIK1P39086 918 aa14.43□□□□□ -0.1
CDX2-202ENST00000548877 GAD2Q05329 585 aa14.43□□□□□ -0.1
CDX2-202ENST00000548877 SLC41A1Q8IVJ1 513 aa14.43□□□□□ -0.1
CDX2-202ENST00000548877 PGBD3Q8N328 593 aa14.43□□□□□ -0.1
CDX2-202ENST00000548877 KRI1Q8N9T8 703 aaKnown RBP14.43□□□□□ -0.1
CDX2-202ENST00000548877 ZSWIM2Q8NEG5 633 aa14.43□□□□□ -0.1
CDX2-202ENST00000548877 MYCBPAPQ8TBZ2 947 aa14.43□□□□□ -0.1
CDX2-202ENST00000548877 PCED1BQ96HM7 432 aa14.43□□□□□ -0.1
CDX2-202ENST00000548877 FAM124BQ9H5Z6 455 aaPredicted RBP14.43□□□□□ -0.1
CDX2-202ENST00000548877 SCUBE2Q9NQ36 999 aa14.43□□□□□ -0.1
CDX2-202ENST00000548877 RBAKQ9NYW8 714 aaPredicted RBP14.43□□□□□ -0.1
CDX2-202ENST00000548877 CALCOCO1Q9P1Z2 691 aa14.43□□□□□ -0.1
CDX2-202ENST00000548877 KIAA1522Q9P206 1035 aaPredicted RBP14.43□□□□□ -0.1
CDX2-202ENST00000548877 CFAP97Q9P2B7 532 aa14.43□□□□□ -0.1
CDX2-202ENST00000548877 KIF3AQ9Y496 699 aa14.43□□□□□ -0.1
CDX2-202ENST00000548877 SH3BP5O60239 455 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 CBFA2T3O75081 653 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 FTH1P19P0C7X4 201 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 ANXA13P27216 316 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 KCNA1Q09470 495 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 MYO1EQ12965 1108 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 COL28A1Q2UY09 1125 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 LY6G5CQ5SRR4 150 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 L1TD1Q5T7N2 865 aaKnown RBP14.42□□□□□ -0.1
CDX2-202ENST00000548877 C19orf48Q6RUI8 117 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 SFR1Q86XK3 245 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 ZNF513Q8N8E2 541 aaPredicted RBP14.42□□□□□ -0.1
CDX2-202ENST00000548877 OVCA2Q8WZ82 227 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 ZFRQ96KR1 1074 aaKnown RBP14.42□□□□□ -0.1
CDX2-202ENST00000548877 ACCSQ96QU6 501 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 ZDHHC5Q9C0B5 715 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 CCDC86Q9H6F5 360 aaKnown RBP14.42□□□□□ -0.1
CDX2-202ENST00000548877 ZDHHC4Q9NPG8 344 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 SMPD4Q9NXE4 827 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 CHMP5Q9NZZ3 219 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 CELSR3Q9NYQ7 3312 aa14.42□□□□□ -0.1
CDX2-202ENST00000548877 SETXQ7Z333 2677 aaKnown RBP14.41□□□□□ -0.1
CDX2-202ENST00000548877 TBC1D3BA6NDS4 549 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 F8VP50 259 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 TULP3O75386 442 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 NTSR1P30989 418 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 PSMC1P62191 440 aaKnown RBP14.41□□□□□ -0.1
CDX2-202ENST00000548877 KDSRQ06136 332 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 TAF10Q12962 218 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 SNX30Q5VWJ9 437 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 MCTP1Q6DN14 999 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 NUDT18Q6ZVK8 323 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 TRIML1Q8N9V2 468 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 TERB1Q8NA31 727 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 OR2I1PQ8NGU4 316 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 SAAL1Q96ER3 474 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 HPDLQ96IR7 371 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 CAMK1GQ96NX5 476 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 SLITRK1Q96PX8 696 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 MTMR12Q9C0I1 747 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 PDE11AQ9HCR9 933 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 OLFML3Q9NRN5 406 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 INTS13Q9NVM9 706 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 DEC1Q9P2X7 70 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 SUSD2Q9UGT4 822 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 NFE2L3Q9Y4A8 694 aa14.41□□□□□ -0.1
CDX2-202ENST00000548877 URB1O60287 2271 aaKnown RBP14.41□□□□□ -0.1
CDX2-202ENST00000548877 HELZ2Q9BYK8 2649 aaKnown RBP14.4□□□□□ -0.1
CDX2-202ENST00000548877 KIAA0391O15091 583 aaKnown RBP14.4□□□□□ -0.1
CDX2-202ENST00000548877 DKK1O94907 266 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 BMP15O95972 392 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 KRT19P08727 400 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 TMEM191BP0C7N4 346 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 MBL2P11226 248 aaPredicted RBP14.4□□□□□ -0.1
CDX2-202ENST00000548877 HOXB2P14652 356 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 GAP43P17677 238 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 TUBP50607 506 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 CYP27A1Q02318 531 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 GRIN1Q05586 938 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 TDRD10Q5VZ19 366 aaKnown RBP14.4□□□□□ -0.1
CDX2-202ENST00000548877 TOGARAM2Q6ZUX3 1019 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 NAXDQ8IW45 347 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 DEFB119Q8N690 84 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 PDZD8Q8NEN9 1154 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 DNASE2BQ8WZ79 361 aa14.4□□□□□ -0.1
CDX2-202ENST00000548877 DNAJC19Q96DA6 116 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms