RNA–Protein interactions for RNA: ENST00000548470.1

TUBA1C-203, Transcript of tubulin alpha 1c, humanhuman

TSL 2

Gene TUBA1C, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1C-203ENST00000548470 DDR2Q16832 855 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 TSR1Q2NL82 804 aaKnown RBP12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 FAM78AQ5JUQ0 283 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 DENND5BQ6ZUT9 1274 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 TOGARAM2Q6ZUX3 1019 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 GAREM2Q75VX8 874 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 PASD1Q8IV76 773 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 SCN4BQ8IWT1 228 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 C17orf53Q8N3J3 647 aaPredicted RBP12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 ACRBPQ8NEB7 543 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 DEPDC1BQ8WUY9 529 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 ING5Q8WYH8 240 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 MRPS31Q92665 395 aaKnown RBP12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 FGF14Q92915 247 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 PBXIP1Q96AQ6 731 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 ASIC4Q96FT7 647 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 SHDQ96IW2 340 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 FAM81BQ96LP2 452 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 B3GNT5Q9BYG0 378 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 NUCKS1Q9H1E3 243 aaKnown RBP12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 NHEJ1Q9H9Q4 299 aaPredicted RBP12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 IL21Q9HBE4 155 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 C11orf16Q9NQ32 467 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 TRPV5Q9NQA5 729 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 FAM49BQ9NUQ9 324 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 ARIH1Q9Y4X5 557 aaPredicted RBP12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 PTPRDP23468 1912 aa12.38□□□□□ -0.43
TUBA1C-203ENST00000548470 A0A0U1RQJ8 604 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 DDX3XO00571 662 aaKnown RBP eCLIP12.37□□□□□ -0.433e-6■□□□□ 11
TUBA1C-203ENST00000548470 RTN3O95197 1032 aaPredicted RBP12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 CCDC130P13994 396 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 CLCN5P51795 746 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 KIF11P52732 1056 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 MLLT6P55198 1093 aaPredicted RBP12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 GPR158Q5T848 1215 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 TANGO2Q6ICL3 276 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 MON1AQ86VX9 555 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 MFSD6LQ8IWD5 586 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 FBXL6Q8N531 539 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 C12orf29Q8N999 325 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 ZSCAN18Q8TBC5 510 aaPredicted RBP12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 ATRIPQ8WXE1 791 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 RSAD2Q8WXG1 361 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 OVCA2Q8WZ82 227 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 DDX1Q92499 740 aaKnown RBP12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 JAKMIP2Q96AA8 810 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 SMARCD1Q96GM5 515 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 PCDHB18PQ96TA0 734 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 HNRNPABQ99729 332 aaKnown RBP12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 PRRX2Q99811 253 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 AGPAT1Q99943 283 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 MED10Q9BTT4 135 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 TRMT61BQ9BVS5 477 aaKnown RBP12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 TTLL2Q9BWV7 592 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 SLITRK6Q9H5Y7 841 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 CSNK1G1Q9HCP0 422 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 ZNF334Q9HCZ1 680 aaPredicted RBP12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 SEPT11Q9NVA2 429 aaKnown RBP12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 FBXL21Q9UKT6 434 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 TFR2Q9UP52 801 aa12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 REXO2Q9Y3B8 237 aaKnown RBP12.37□□□□□ -0.43
TUBA1C-203ENST00000548470 A0A087X0T9 212 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 DPYSL4O14531 572 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 ZNF263O14978 683 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 FAM228BP0C875 321 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 GLULP15104 373 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 PSMC3P17980 439 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 CDK17Q00537 523 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 FMO1Q01740 532 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 GFPT1Q06210 699 aaPredicted RBP12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 ASTE1Q2TB18 679 aaPredicted RBP12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 DENND1BQ6P3S1 775 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 TMTC1Q8IUR5 882 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 ARID3BQ8IVW6 561 aaPredicted RBP12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 SUGP1Q8IWZ8 645 aaKnown RBP12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 FUKQ8N0W3 1084 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 NUP93Q8N1F7 819 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 KIAA1958Q8N8K9 716 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 CCDC112Q8NEF3 446 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 PDZD8Q8NEN9 1154 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 DNASE1L2Q92874 299 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 IRF7Q92985 503 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 CYFIP2Q96F07 1278 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 TMEM176AQ96HP8 235 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 HEXIM2Q96MH2 286 aaKnown RBP12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 ZSWIM3Q96MP5 696 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 UBXN6Q9BZV1 441 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 KIF9Q9HAQ2 790 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 PNPLA8Q9NP80 782 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 DMAP1Q9NPF5 467 aaPredicted RBP12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 THG1LQ9NWX6 298 aaKnown RBP12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 TAS2R14Q9NYV8 317 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 TRPM5Q9NZQ8 1165 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 MAGED2Q9UNF1 606 aaPredicted RBP12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 DENND4AQ7Z401 1863 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 BRWD1Q9NSI6 2320 aa12.36□□□□□ -0.43
TUBA1C-203ENST00000548470 TMCO5BA8MYB1 307 aa12.35□□□□□ -0.43
TUBA1C-203ENST00000548470 F8VP50 259 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms