RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 PTPN9P43378 593 aa21.9■■□□□ 1.1
RITA1-201ENST00000548278 CDH6P55285 790 aa21.9■■□□□ 1.1
RITA1-201ENST00000548278 KRT71Q3SY84 523 aa21.9■■□□□ 1.1
RITA1-201ENST00000548278 DNAJC21Q5F1R6 531 aaKnown RBP21.9■■□□□ 1.1
RITA1-201ENST00000548278 HIBCHQ6NVY1 386 aaPredicted RBP21.9■■□□□ 1.1
RITA1-201ENST00000548278 KDM7AQ6ZMT4 941 aa21.9■■□□□ 1.1
RITA1-201ENST00000548278 RFX6Q8HWS3 928 aa21.9■■□□□ 1.1
RITA1-201ENST00000548278 TMEM121Q9BTD3 319 aa21.9■■□□□ 1.1
RITA1-201ENST00000548278 C11orf84Q9BUA3 381 aaPredicted RBP21.9■■□□□ 1.1
RITA1-201ENST00000548278 ADAM7Q9H2U9 754 aa21.9■■□□□ 1.1
RITA1-201ENST00000548278 A0A0U1RQF3 1178 aa21.89■■□□□ 1.1
RITA1-201ENST00000548278 ETS1P14921 441 aa21.89■■□□□ 1.1
RITA1-201ENST00000548278 RPL9P32969 192 aaKnown RBP21.89■■□□□ 1.1
RITA1-201ENST00000548278 PLCB3Q01970 1234 aa21.89■■□□□ 1.1
RITA1-201ENST00000548278 MMRN1Q13201 1228 aa21.89■■□□□ 1.1
RITA1-201ENST00000548278 DPYSL3Q14195 570 aa21.89■■□□□ 1.1
RITA1-201ENST00000548278 P3H1Q32P28 736 aa21.89■■□□□ 1.1
RITA1-201ENST00000548278 BOLA3Q53S33 107 aa21.89■■□□□ 1.1
RITA1-201ENST00000548278 TEKT4Q8WW24 435 aa21.89■■□□□ 1.1
RITA1-201ENST00000548278 NOD1Q9Y239 953 aa21.89■■□□□ 1.1
RITA1-201ENST00000548278 APOC4-APOC2K7ER74 178 aa21.89■■□□□ 1.09
RITA1-201ENST00000548278 CLDN5O00501 218 aa21.89■■□□□ 1.09
RITA1-201ENST00000548278 APOC2P02655 101 aa21.89■■□□□ 1.09
RITA1-201ENST00000548278 NR1D1P20393 614 aa21.89■■□□□ 1.09
RITA1-201ENST00000548278 HDAC4P56524 1084 aa21.89■■□□□ 1.09
RITA1-201ENST00000548278 PIGZQ86VD9 579 aa21.89■■□□□ 1.09
RITA1-201ENST00000548278 TMEM86AQ8N2M4 240 aa21.89■■□□□ 1.09
RITA1-201ENST00000548278 CENPIQ92674 756 aaPredicted RBP21.89■■□□□ 1.09
RITA1-201ENST00000548278 NCAPGQ9BPX3 1015 aa21.89■■□□□ 1.09
RITA1-201ENST00000548278 CDC42EP4Q9H3Q1 356 aaKnown RBP21.89■■□□□ 1.09
RITA1-201ENST00000548278 DDX43Q9NXZ2 648 aaKnown RBP21.89■■□□□ 1.09
RITA1-201ENST00000548278 CASTOR2A6NHX0 329 aa21.88■■□□□ 1.09
RITA1-201ENST00000548278 TFE3P19532 575 aaPredicted RBP21.88■■□□□ 1.09
RITA1-201ENST00000548278 UPP1Q16831 310 aa21.88■■□□□ 1.09
RITA1-201ENST00000548278 SCYL2Q6P3W7 929 aa21.88■■□□□ 1.09
RITA1-201ENST00000548278 TBCBQ99426 244 aa21.88■■□□□ 1.09
RITA1-201ENST00000548278 ADAM2Q99965 735 aa21.88■■□□□ 1.09
RITA1-201ENST00000548278 PAAF1Q9BRP4 392 aa21.88■■□□□ 1.09
RITA1-201ENST00000548278 ADAM33Q9BZ11 813 aa21.88■■□□□ 1.09
RITA1-201ENST00000548278 PCDH9Q9HC56 1237 aa21.88■■□□□ 1.09
RITA1-201ENST00000548278 CRTAC1Q9NQ79 661 aa21.88■■□□□ 1.09
RITA1-201ENST00000548278 DNALI1O14645 258 aaPredicted RBP21.87■■□□□ 1.09
RITA1-201ENST00000548278 PECAM1P16284 738 aaPredicted RBP21.87■■□□□ 1.09
RITA1-201ENST00000548278 NPR3P17342 541 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 LHX1P48742 406 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 PDK2Q15119 407 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 MDH1BQ5I0G3 518 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 RNF169Q8NCN4 708 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 RAET1EQ8TD07 263 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 PXYLP1Q8TE99 480 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 PWWP2AQ96N64 755 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 DDX23Q9BUQ8 820 aaKnown RBP21.87■■□□□ 1.09
RITA1-201ENST00000548278 TMEM109Q9BVC6 243 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 SGK1O00141 431 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 BEST1O76090 585 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 DESP17661 470 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 IL4RP24394 825 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 GPS1Q13098 491 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 DSTYKQ6XUX3 929 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 HOOK3Q86VS8 718 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 CAPS2Q9BXY5 557 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 CREBZFQ9NS37 354 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 TIMM13Q9Y5L4 95 aaPredicted RBP21.87■■□□□ 1.09
RITA1-201ENST00000548278 SQORQ9Y6N5 450 aa21.87■■□□□ 1.09
RITA1-201ENST00000548278 MDM4O15151 490 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 SLC8A3P57103 927 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 ZC3H12AQ5D1E8 599 aaKnown RBP21.86■■□□□ 1.09
RITA1-201ENST00000548278 MAP7D3Q8IWC1 876 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 RNF157Q96PX1 679 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 SNRNP25Q9BV90 132 aaKnown RBP21.86■■□□□ 1.09
RITA1-201ENST00000548278 MAK16Q9BXY0 300 aaKnown RBP21.86■■□□□ 1.09
RITA1-201ENST00000548278 GPATCH2LQ9NWQ4 482 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 BCCIPQ9P287 314 aaKnown RBP eCLIP21.86■■□□□ 1.09
RITA1-201ENST00000548278 TDRD15B5MCY1 1934 aaKnown RBP21.86■■□□□ 1.09
RITA1-201ENST00000548278 ERICH4A6NGS2 130 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 MOXD2PA6NHM9 499 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 CAND2O75155 1236 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 ATP1A2P50993 1020 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 ADCY1Q08828 1119 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 ADIGQ0VDE8 80 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 KRT81Q14533 505 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 CLEC20AQ6ZU45 233 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 VSIG1Q86XK7 387 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 RELL1Q8IUW5 271 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 ZCCHC9Q8N567 271 aaKnown RBP21.86■■□□□ 1.09
RITA1-201ENST00000548278 UHMK1Q8TAS1 419 aaKnown RBP21.86■■□□□ 1.09
RITA1-201ENST00000548278 KCTD13Q8WZ19 329 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 SYT15Q9BQS2 421 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 FOXP3Q9BZS1 431 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 C10orf88Q9H8K7 445 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 PCDH18Q9HCL0 1135 aa21.86■■□□□ 1.09
RITA1-201ENST00000548278 DNAJC17Q9NVM6 304 aaKnown RBP21.86■■□□□ 1.09
RITA1-201ENST00000548278 TPX2Q9ULW0 747 aaKnown RBP21.86■■□□□ 1.09
RITA1-201ENST00000548278 TTC4O95801 387 aa21.85■■□□□ 1.09
RITA1-201ENST00000548278 POMCP01189 267 aa21.85■■□□□ 1.09
RITA1-201ENST00000548278 IFNB1P01574 187 aa21.85■■□□□ 1.09
RITA1-201ENST00000548278 ACTN2P35609 894 aa21.85■■□□□ 1.09
RITA1-201ENST00000548278 GDF10P55107 478 aa21.85■■□□□ 1.09
RITA1-201ENST00000548278 TFDP2Q14188 446 aa21.85■■□□□ 1.09
RITA1-201ENST00000548278 CA9Q16790 459 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms