RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 GDPD2Q9HCC8 539 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 TMEM30AQ9NV96 361 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 GMEB2Q9UKD1 530 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 ARHGAP26Q9UNA1 814 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 SLC8A2Q9UPR5 921 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 HPSEQ9Y251 543 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 FRMD4BQ9Y2L6 1034 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 ATP6V1DQ9Y5K8 247 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 TRIP11Q15643 1979 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 WDR87Q6ZQQ6 2873 aa7.13□□□□□ -1.27
SCAF11-211ENST00000547950 RIF1Q5UIP0 2472 aaKnown RBP7.12□□□□□ -1.27
SCAF11-211ENST00000547950 MYO15AQ9UKN7 3530 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 KIF20AO95235 890 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 VNN1O95497 513 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 MYL1P05976 194 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 MBL2P11226 248 aaPredicted RBP7.12□□□□□ -1.27
SCAF11-211ENST00000547950 P4HA1P13674 534 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 DRD1P21728 446 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 CNR2P34972 360 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 PPP3CCP48454 512 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 RPIAP49247 311 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 VAMP7P51809 220 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 CLDN10P78369 228 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 ZXDBP98169 803 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 FOXK2Q01167 660 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 PUM1Q14671 1186 aaKnown RBP eCLIP7.12□□□□□ -1.277e-10■□□□□ 8.7
SCAF11-211ENST00000547950 EML3Q32P44 896 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 LAIR1Q6GTX8 287 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 SPOPLQ6IQ16 392 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 SV2AQ7L0J3 742 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 ERMP1Q7Z2K6 904 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 DGLUCYQ7Z3D6 616 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 ADGRG2Q8IZP9 1017 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 NUP93Q8N1F7 819 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 GPR161Q8N6U8 529 aaKnown RBP7.12□□□□□ -1.27
SCAF11-211ENST00000547950 SCAMP5Q8TAC9 235 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 CD101Q93033 1021 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 TNIP3Q96KP6 325 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 TTLL2Q9BWV7 592 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 SCAND2PQ9GZW5 306 aaPredicted RBP7.12□□□□□ -1.27
SCAF11-211ENST00000547950 SDCBP2Q9H190 292 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 MMRN2Q9H8L6 949 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 VRTNQ9H8Y1 702 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 CFAP97Q9P2B7 532 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 CPQQ9Y646 472 aa7.12□□□□□ -1.27
SCAF11-211ENST00000547950 CITO14578 2027 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 ATP8B3O60423 1300 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 IKBKBO14920 756 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 AXIN1O15169 862 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 ST8SIA5O15466 376 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 ZBTB24O43167 697 aaPredicted RBP7.11□□□□□ -1.27
SCAF11-211ENST00000547950 AP1G2O75843 785 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 AKAP3O75969 853 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 BEST1O76090 585 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 RHOBTB3O94955 611 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 ZNF202O95125 648 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 RTN3O95197 1032 aaPredicted RBP7.11□□□□□ -1.27
SCAF11-211ENST00000547950 PAPSS2O95340 614 aaPredicted RBP7.11□□□□□ -1.27
SCAF11-211ENST00000547950 NFATC1O95644 943 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 HLA-DRAP01903 254 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 RETP07949 1114 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 TRIM49P0CI25 452 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 TRIM49CP0CI26 452 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 KRT13P13646 458 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 CCDC130P13994 396 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 TGM1P22735 817 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 NR2F2P24468 414 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 RPL13P26373 211 aaKnown RBP7.11□□□□□ -1.27
SCAF11-211ENST00000547950 HOXA6P31267 233 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 PIK3CAP42336 1068 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 SLC6A11P48066 632 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 GCLMP48507 274 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 NDST1P52848 882 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 SEC13P55735 322 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 SLC7A9P82251 487 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 DPYDQ12882 1025 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 USP4Q13107 963 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 ADAM9Q13443 819 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 ZACNQ401N2 412 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 C2orf27AQ580R0 203 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 C1orf220Q5T0J3 134 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 KRBA2Q6ZNG9 492 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 PAQR9Q6ZVX9 377 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.11□□□□□ -1.27
SCAF11-211ENST00000547950 FILIP1Q7Z7B0 1213 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 FAM35AQ86V20 835 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 WDR5BQ86VZ2 330 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 FUKQ8N0W3 1084 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 C12orf29Q8N999 325 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 RPLP0P6Q8NHW5 317 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 SLC2A14Q8TDB8 520 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 TAF4BQ92750 862 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 EZH1Q92800 747 aaPredicted RBP7.11□□□□□ -1.27
SCAF11-211ENST00000547950 FBXO32Q969P5 355 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 JAKMIP2Q96AA8 810 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 ZNF775Q96BV0 537 aaPredicted RBP7.11□□□□□ -1.27
SCAF11-211ENST00000547950 EEF2KMTQ96G04 330 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 HHIPQ96QV1 700 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 GOLPH3LQ9H4A5 285 aa7.11□□□□□ -1.27
SCAF11-211ENST00000547950 PARD6AQ9NPB6 346 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms