RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 CRADDP78560 199 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 MPP2Q14168 576 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 SEPT7Q16181 437 aaKnown RBP13.29□□□□□ -0.28
SCAF11-209ENST00000547018 PKN2Q16513 984 aaKnown RBP13.29□□□□□ -0.28
SCAF11-209ENST00000547018 NBPF20Q3BBV1 942 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 CCDC14Q49A88 953 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 MDH1BQ5I0G3 518 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 PPP1R15BQ5SWA1 713 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 ALLCQ8N6M5 410 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 C12orf50Q8NA57 414 aaPredicted RBP13.29□□□□□ -0.28
SCAF11-209ENST00000547018 SPOCK2Q92563 424 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 WNT8BQ93098 351 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 KCNK16Q96T55 309 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 CNPY3Q9BT09 278 aa13.29□□□□□ -0.28
SCAF11-209ENST00000547018 SNRNP25Q9BV90 132 aaKnown RBP13.29□□□□□ -0.28
SCAF11-209ENST00000547018 DDX20Q9UHI6 824 aaKnown RBP13.29□□□□□ -0.28
SCAF11-209ENST00000547018 SLC15A5A6NIM6 579 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 A6NJR5 290 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 DNALI1O14645 258 aaPredicted RBP13.28□□□□□ -0.28
SCAF11-209ENST00000547018 ZBED1O96006 694 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 PFKMP08237 780 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 IRX4P78413 519 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 ZNF268Q14587 947 aaPredicted RBP13.28□□□□□ -0.28
SCAF11-209ENST00000547018 DSTYKQ6XUX3 929 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 TAOK1Q7L7X3 1001 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 ADGRF2Q8IZF7 708 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 CACNA2D3Q8IZS8 1091 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 CXorf38Q8TB03 319 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 LRRC4Q9HBW1 653 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 DDX56Q9NY93 547 aaKnown RBP13.28□□□□□ -0.28
SCAF11-209ENST00000547018 C2CD2Q9Y426 696 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 CDY2AQ9Y6F7 541 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 MYO7AQ13402 2215 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 A0A1W2PPM1 405 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 TCRBV5S1A1TA0A578 114 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 F2P00734 622 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 NUDT17P0C025 328 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 ROR1Q01973 937 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 GBE1Q04446 702 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 GKAP1Q5VSY0 366 aaPredicted RBP13.28□□□□□ -0.28
SCAF11-209ENST00000547018 CCDC121Q6ZUS5 278 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 TRMT10CQ7L0Y3 403 aaKnown RBP13.28□□□□□ -0.28
SCAF11-209ENST00000547018 FBXO36Q8NEA4 188 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 SEC16BQ96JE7 1060 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 SNX27Q96L92 541 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 F8W810 466 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 FAM107AO95990 144 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 ZNF865P0CJ78 1059 aaPredicted RBP13.28□□□□□ -0.28
SCAF11-209ENST00000547018 CA4P22748 312 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 KLRC2P26717 231 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 TKTP29401 623 aaKnown RBP13.28□□□□□ -0.28
SCAF11-209ENST00000547018 ATICP31939 592 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 FLT3LGP49771 235 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 ZNF143P52747 638 aaPredicted RBP13.28□□□□□ -0.28
SCAF11-209ENST00000547018 CACNB2Q08289 660 aaPredicted RBP13.28□□□□□ -0.28
SCAF11-209ENST00000547018 PIGZQ86VD9 579 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 ZNF410Q86VK4 478 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 EIF1ADQ8N9N8 165 aaKnown RBP13.28□□□□□ -0.28
SCAF11-209ENST00000547018 AGAP3Q96P47 875 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 LHX5Q9H2C1 402 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 CYP3A43Q9HB55 503 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 NKIRAS1Q9NYS0 192 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 UBQLN1Q9UMX0 589 aaKnown RBP13.28□□□□□ -0.28
SCAF11-209ENST00000547018 ST3GAL5Q9UNP4 418 aa13.28□□□□□ -0.28
SCAF11-209ENST00000547018 C2CD4BA6NLJ0 364 aa13.27□□□□□ -0.28
SCAF11-209ENST00000547018 GABBR2O75899 941 aa13.27□□□□□ -0.28
SCAF11-209ENST00000547018 TMEM63AO94886 807 aa13.27□□□□□ -0.28
SCAF11-209ENST00000547018 GBP1P32455 592 aa13.27□□□□□ -0.28
SCAF11-209ENST00000547018 TAF6P49848 677 aa13.27□□□□□ -0.28
SCAF11-209ENST00000547018 CPT1AP50416 773 aa13.27□□□□□ -0.28
SCAF11-209ENST00000547018 LMNB2Q03252 620 aa13.27□□□□□ -0.28
SCAF11-209ENST00000547018 LCLAT1Q6UWP7 414 aa13.27□□□□□ -0.28
SCAF11-209ENST00000547018 CENPUQ71F23 418 aa13.27□□□□□ -0.28
SCAF11-209ENST00000547018 DEFB106AQ8N104 65 aa13.27□□□□□ -0.28
SCAF11-209ENST00000547018 CCDC185Q8N715 623 aa13.27□□□□□ -0.28
SCAF11-209ENST00000547018 CHMP6Q96FZ7 201 aa13.27□□□□□ -0.28
SCAF11-209ENST00000547018 TRAPPC3O43617 180 aa13.27□□□□□ -0.29
SCAF11-209ENST00000547018 B3GAT3O94766 335 aa13.27□□□□□ -0.29
SCAF11-209ENST00000547018 CTGFP29279 349 aa13.27□□□□□ -0.29
SCAF11-209ENST00000547018 TAP1Q03518 808 aa13.27□□□□□ -0.29
SCAF11-209ENST00000547018 DCAF4L1Q3SXM0 396 aa13.27□□□□□ -0.29
SCAF11-209ENST00000547018 TP53INP2Q8IXH6 220 aa13.27□□□□□ -0.29
SCAF11-209ENST00000547018 LINC01465Q8N7H1 131 aa13.27□□□□□ -0.29
SCAF11-209ENST00000547018 DEPDC1BQ8WUY9 529 aa13.27□□□□□ -0.29
SCAF11-209ENST00000547018 RNF34Q969K3 372 aa13.27□□□□□ -0.29
SCAF11-209ENST00000547018 RASSF4Q9H2L5 321 aa13.27□□□□□ -0.29
SCAF11-209ENST00000547018 ETNK2Q9NVF9 386 aa13.27□□□□□ -0.29
SCAF11-209ENST00000547018 IL1RAPL1Q9NZN1 696 aa13.27□□□□□ -0.29
SCAF11-209ENST00000547018 WDR35Q9P2L0 1181 aa13.27□□□□□ -0.29
SCAF11-209ENST00000547018 PPME1Q9Y570 386 aa13.27□□□□□ -0.29
SCAF11-209ENST00000547018 DICER1Q9UPY3 1922 aaKnown RBP13.27□□□□□ -0.29
SCAF11-209ENST00000547018 AGTP01019 485 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 CD52P31358 61 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 CLCNKBP51801 687 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 LILRA4P59901 499 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 FAM187BQ17R55 369 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 SPRED3Q2MJR0 410 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 RHBDF2Q6PJF5 856 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 HFE2Q6ZVN8 426 aa13.26□□□□□ -0.29
SCAF11-209ENST00000547018 OSTM1Q86WC4 334 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms