RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 AMPD2Q01433 879 aa16.79■□□□□ 0.28
DDX54-204ENST00000546898 GCNT1Q02742 428 aa16.79■□□□□ 0.28
DDX54-204ENST00000546898 TNK2Q07912 1038 aa16.79■□□□□ 0.28
DDX54-204ENST00000546898 RUNX3Q13761 415 aa16.79■□□□□ 0.28
DDX54-204ENST00000546898 TPD52L1Q16890 204 aaPredicted RBP16.79■□□□□ 0.28
DDX54-204ENST00000546898 HECTD3Q5T447 861 aa16.79■□□□□ 0.28
DDX54-204ENST00000546898 C1orf210Q8IVY1 113 aa16.79■□□□□ 0.28
DDX54-204ENST00000546898 PPM1KQ8N3J5 372 aa16.79■□□□□ 0.28
DDX54-204ENST00000546898 EHBP1Q8NDI1 1231 aa16.79■□□□□ 0.28
DDX54-204ENST00000546898 ATOH1Q92858 354 aaPredicted RBP16.79■□□□□ 0.28
DDX54-204ENST00000546898 MED15Q96RN5 788 aa16.79■□□□□ 0.28
DDX54-204ENST00000546898 TLR8Q9NR97 1041 aaKnown RBP16.79■□□□□ 0.28
DDX54-204ENST00000546898 GMIPQ9P107 970 aa16.79■□□□□ 0.28
DDX54-204ENST00000546898 CPQQ9Y646 472 aa16.79■□□□□ 0.28
DDX54-204ENST00000546898 LEFTY2O00292 366 aa16.78■□□□□ 0.28
DDX54-204ENST00000546898 ERCC5P28715 1186 aaPredicted RBP16.78■□□□□ 0.28
DDX54-204ENST00000546898 SOX9P48436 509 aa16.78■□□□□ 0.28
DDX54-204ENST00000546898 SLC8A3P57103 927 aa16.78■□□□□ 0.28
DDX54-204ENST00000546898 FZD5Q13467 585 aa16.78■□□□□ 0.28
DDX54-204ENST00000546898 LRRC32Q14392 662 aa16.78■□□□□ 0.28
DDX54-204ENST00000546898 DPCR1Q3MIW9 517 aa16.78■□□□□ 0.28
DDX54-204ENST00000546898 SGO2Q562F6 1265 aa16.78■□□□□ 0.28
DDX54-204ENST00000546898 CT47A1Q5JQC4 288 aaPredicted RBP16.78■□□□□ 0.28
DDX54-204ENST00000546898 TRIM68Q6AZZ1 485 aa16.78■□□□□ 0.28
DDX54-204ENST00000546898 CPA6Q8N4T0 437 aa16.78■□□□□ 0.28
DDX54-204ENST00000546898 ATP2A3Q93084 1043 aa16.78■□□□□ 0.28
DDX54-204ENST00000546898 UBXN6Q9BZV1 441 aa16.78■□□□□ 0.28
DDX54-204ENST00000546898 RNF38Q9H0F5 515 aa16.78■□□□□ 0.28
DDX54-204ENST00000546898 EBF3Q9H4W6 596 aa16.78■□□□□ 0.28
DDX54-204ENST00000546898 DUS2Q9NX74 493 aaKnown RBP16.78■□□□□ 0.28
DDX54-204ENST00000546898 KIAA1257Q9ULG3 409 aa16.78■□□□□ 0.28
DDX54-204ENST00000546898 SCML2Q9UQR0 700 aa16.78■□□□□ 0.28
DDX54-204ENST00000546898 PAEPP09466 180 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 MBL2P11226 248 aaPredicted RBP16.77■□□□□ 0.28
DDX54-204ENST00000546898 VDRP11473 427 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 ACO1P21399 889 aaKnown RBP16.77■□□□□ 0.28
DDX54-204ENST00000546898 KIF11P52732 1056 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 EML3Q32P44 896 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 DGKKQ5KSL6 1271 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 TXNDC11Q6PKC3 985 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 GPRIN1Q7Z2K8 1008 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 FAM114A1Q8IWE2 563 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 ANKRD52Q8NB46 1076 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 TTC8Q8TAM2 541 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 GPT2Q8TD30 523 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 EXOC4Q96A65 974 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 JAKMIP2Q96AA8 810 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 CHRDQ9H2X0 955 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 THAP9Q9H5L6 903 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 SPATA6Q9NWH7 488 aaPredicted RBP16.77■□□□□ 0.28
DDX54-204ENST00000546898 HESX1Q9UBX0 185 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 CHORDC1Q9UHD1 332 aaPredicted RBP16.77■□□□□ 0.28
DDX54-204ENST00000546898 TSPAN16Q9UKR8 245 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 WNT6Q9Y6F9 365 aa16.77■□□□□ 0.28
DDX54-204ENST00000546898 KIAA1549LQ6ZVL6 1849 aa16.77■□□□□ 0.27
DDX54-204ENST00000546898 SLC9A3R1O14745 358 aaPredicted RBP16.76■□□□□ 0.27
DDX54-204ENST00000546898 COCHO43405 550 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 LAMTOR5O43504 91 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 NFATC1O95644 943 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 CHRNB1P11230 501 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 ARSAP15289 507 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 CD19P15391 556 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 NBL1P41271 181 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 PSEN1P49768 467 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 BCAT1P54687 386 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 ZXDBP98169 803 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 GOLGA7BQ2TAP0 167 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 TMEM270Q6UE05 265 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 RBM43Q6ZSC3 357 aaKnown RBP16.76■□□□□ 0.27
DDX54-204ENST00000546898 CCDC186Q7Z3E2 898 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 TTC16Q8NEE8 873 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 FAM81BQ96LP2 452 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 INTS2Q9H0H0 1204 aaKnown RBP16.76■□□□□ 0.27
DDX54-204ENST00000546898 CCSER2Q9H7U1 834 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 ECT2Q9H8V3 914 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 LMAN1LQ9HAT1 526 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 CYLDQ9NQC7 956 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 FAM86C1Q9NVL1 165 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 FBXO4Q9UKT5 387 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 PCDHB4Q9Y5E5 795 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 USP3Q9Y6I4 520 aa16.76■□□□□ 0.27
DDX54-204ENST00000546898 GTPBP10A4D1E9 387 aaKnown RBP16.75■□□□□ 0.27
DDX54-204ENST00000546898 XPO1O14980 1071 aaKnown RBP16.75■□□□□ 0.27
DDX54-204ENST00000546898 CYP26A1O43174 497 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 TLR5O60602 858 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 MBD3O95983 291 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 SETSIPP0DME0 302 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 BST2Q10589 180 aaKnown RBP16.75■□□□□ 0.27
DDX54-204ENST00000546898 NR1H3Q13133 447 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 PON2Q15165 354 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 STILQ15468 1287 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 RAB41Q5JT25 222 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 MAMSTRQ6ZN01 415 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 PIGZQ86VD9 579 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 TTC30AQ86WT1 665 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 IRF2BP1Q8IU81 584 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 ARHGEF19Q8IW93 802 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 SYNPOQ8N3V7 929 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 ZNF276Q8N554 614 aa16.75■□□□□ 0.27
DDX54-204ENST00000546898 KAT5Q92993 513 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms