RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 SYT15Q9BQS2 421 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 INTS2Q9H0H0 1204 aaKnown RBP14.23□□□□□ -0.13
RAB5B-203ENST00000546810 C8orf33Q9H7E9 229 aaPredicted RBP14.23□□□□□ -0.13
RAB5B-203ENST00000546810 VPS45Q9NRW7 570 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 TAB2Q9NYJ8 693 aa14.23□□□□□ -0.13
RAB5B-203ENST00000546810 LIMA1Q9UHB6 759 aaKnown RBP14.23□□□□□ -0.13
RAB5B-203ENST00000546810 TICRRQ7Z2Z1 1910 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 SLC38A8A6NNN8 435 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 TOP3BO95985 862 aaKnown RBP14.22□□□□□ -0.13
RAB5B-203ENST00000546810 PDGFRBP09619 1106 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 OR4Q2P0C623 313 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 ACAT1P24752 427 aaKnown RBP14.22□□□□□ -0.13
RAB5B-203ENST00000546810 SOX9P48436 509 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 COPB1P53618 953 aaKnown RBP14.22□□□□□ -0.13
RAB5B-203ENST00000546810 ZNF445P59923 1031 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 LRMPQ12912 555 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 CUL2Q13617 745 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 FILIP1LQ4L180 1135 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 SLC39A12Q504Y0 691 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 MIIPQ5JXC2 388 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 C4orf50Q6ZRC1 276 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 PPM1KQ8N3J5 372 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 ZSCAN18Q8TBC5 510 aaPredicted RBP14.22□□□□□ -0.13
RAB5B-203ENST00000546810 SPPL2BQ8TCT7 592 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 TATDN2Q93075 761 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 ELMO3Q96BJ8 720 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 EDEM2Q9BV94 578 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 VPS16Q9H269 839 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 TRPV4Q9HBA0 871 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 CYP4F11Q9HBI6 524 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 HSFX1Q9UBD0 423 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 TRIP11Q15643 1979 aa14.22□□□□□ -0.13
RAB5B-203ENST00000546810 NCANO14594 1321 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 LRRC10BA6NIK2 292 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 HEPACAM2A8MVW5 462 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 CD58P19256 250 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 LMO2P25791 158 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 PXNP49023 591 aaPredicted RBP14.21□□□□□ -0.13
RAB5B-203ENST00000546810 TUFMP49411 452 aaKnown RBP14.21□□□□□ -0.13
RAB5B-203ENST00000546810 PLD1Q13393 1074 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 TCEAL6Q6IPX3 200 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 TXNDC11Q6PKC3 985 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 RNF19BQ6ZMZ0 732 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 ENOSF1Q7L5Y1 443 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 LUZP1Q86V48 1076 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 SPATA2LQ8IUW3 424 aaPredicted RBP14.21□□□□□ -0.13
RAB5B-203ENST00000546810 YAF2Q8IY57 180 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 TCEAL8Q8IYN2 117 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 LMO3Q8TAP4 145 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 TCEAL3Q969E4 200 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 PGLYRP2Q96PD5 576 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 TMEM209Q96SK2 561 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 CRACR2AQ9BSW2 395 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 SCNM1Q9BWG6 230 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 NT5C1AQ9BXI3 368 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 SDCBP2Q9H190 292 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 PCDHB5Q9Y5E4 795 aa14.21□□□□□ -0.13
RAB5B-203ENST00000546810 VWA8A3KMH1 1905 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 CCDC163A0A0D9SF12 145 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 MYBPHLA2RUH7 354 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 MTMR11A4FU01 709 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 C4orf47A7E2U8 309 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 SPECC1L-ADORA2AF8WAN1 911 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 TAF4O00268 1085 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 CHADO15335 359 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 MOSPD3O75425 235 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 SERPINC1P01008 464 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 PTPN1P18031 435 aaKnown RBP14.2□□□□□ -0.14
RAB5B-203ENST00000546810 CTHP32929 405 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 NDST1P52848 882 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 MFAP3P55082 362 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 GCNT1Q02742 428 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 INCA1Q0VD86 236 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 SH3PXD2AQ5TCZ1 1133 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 DAB2IPQ5VWQ8 1189 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 IQCEQ6IPM2 695 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 TRIM65Q6PJ69 517 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 HS6ST3Q8IZP7 471 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 ELMOD1Q8N336 334 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 SYNPOQ8N3V7 929 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 B3GALNT2Q8NCR0 500 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 MYCBPAPQ8TBZ2 947 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 JAKMIP2Q96AA8 810 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 E2F7Q96AV8 911 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 FUBP3Q96I24 572 aaKnown RBP eCLIP14.2□□□□□ -0.14
RAB5B-203ENST00000546810 ABCB6Q9NP58 842 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 CISHQ9NSE2 258 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 GTF3C4Q9UKN8 822 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 INSL5Q9Y5Q6 135 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 SDK1Q7Z5N4 2213 aa14.2□□□□□ -0.14
RAB5B-203ENST00000546810 ATP8B3O60423 1300 aa14.19□□□□□ -0.14
RAB5B-203ENST00000546810 LGALS16A8MUM7 142 aa14.19□□□□□ -0.14
RAB5B-203ENST00000546810 CILPO75339 1184 aa14.19□□□□□ -0.14
RAB5B-203ENST00000546810 SEC24AO95486 1093 aa14.19□□□□□ -0.14
RAB5B-203ENST00000546810 MYL4P12829 197 aa14.19□□□□□ -0.14
RAB5B-203ENST00000546810 GJA1P17302 382 aa14.19□□□□□ -0.14
RAB5B-203ENST00000546810 SLC9A1P19634 815 aa14.19□□□□□ -0.14
RAB5B-203ENST00000546810 PON1P27169 355 aa14.19□□□□□ -0.14
RAB5B-203ENST00000546810 ALDH1A3P47895 512 aa14.19□□□□□ -0.14
RAB5B-203ENST00000546810 PSMC1P62191 440 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms