RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 CDH2P19022 906 aaPredicted RBP12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 ATP4AP20648 1035 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 PSMA4P25789 261 aaKnown RBP12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 HMOX2P30519 316 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 TMED10P49755 219 aaKnown RBP12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 KAT5Q92993 513 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 DAB1O75553 588 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 ALBP02768 609 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 TFE3P19532 575 aaPredicted RBP12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 FLT3P36888 993 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 MARSP56192 900 aaKnown RBP12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 FAAP100Q0VG06 881 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 XRCC4Q13426 336 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 LRRC8BQ6P9F7 803 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 SPIRE2Q8WWL2 714 aa12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 OLA1Q9NTK5 396 aaKnown RBP12.64□□□□□ -0.39
NPC1L1-204ENST00000546276 ARHGAP23Q9P227 1491 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 TPST1O60507 370 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 VIL1P09327 827 aaKnown RBP12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 SUPT20HL2P0C7V6 817 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 TAL1P17542 331 aaPredicted RBP12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 NCALDP61601 193 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 DAB2P98082 770 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 CDC42EP1Q00587 391 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 PPATQ06203 517 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 N4BP2L1Q5TBK1 243 aaPredicted RBP12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 HGSNATQ68CP4 663 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 RASGEF1CQ8N431 466 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 AFG1LQ8WV93 481 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 RXFP2Q8WXD0 754 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 TRAPPC9Q96Q05 1148 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 KCNK4Q9NYG8 393 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 BNIP3LO60238 219 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 HBP1O60381 514 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 FECHP22830 423 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 SOX11P35716 441 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 SLC1A6P48664 564 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 PEX5P50542 639 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 MGAT5Q09328 741 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 PTK2BQ14289 1009 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 PDK4Q16654 411 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 DENND1BQ6P3S1 775 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 TDRD5Q8NAT2 981 aaKnown RBP12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 KYQ8NBH2 561 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 DDHD1Q8NEL9 900 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 NDFIP2Q9NV92 336 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 MCM8Q9UJA3 840 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 TSR3Q9UJK0 312 aaKnown RBP12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 M0R3G1 203 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 CYP3A4P08684 503 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 FAM58BPP0C7Q3 252 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 CAP2P40123 477 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 PTDSS1P48651 473 aaKnown RBP12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 LACTB2Q53H82 288 aaPredicted RBP12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 MPZL3Q6UWV2 235 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 STRA8Q7Z7C7 330 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 PLD3Q8IV08 490 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 ZNF398Q8TD17 642 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 ELMO3Q96BJ8 720 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 PRPF18Q99633 342 aaKnown RBP12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 TMEM247A6NEH6 219 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 MEI4A8MW99 385 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 GNL1P36915 607 aaPredicted RBP12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 SKIV2L2P42285 1042 aaKnown RBP12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 DLG4P78352 724 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 PTPN11Q06124 597 aaPredicted RBP12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 PCSK7Q16549 785 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 EFL1Q7Z2Z2 1120 aaKnown RBP12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 RBM46Q8TBY0 533 aaKnown RBP12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 OTUD5Q96G74 571 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 SLC13A4Q9UKG4 626 aa12.63□□□□□ -0.39
NPC1L1-204ENST00000546276 ZSCAN5DPP0CG00 497 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 CHKAP35790 457 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 TCF7P36402 384 aaPredicted RBP12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 KIAA2013Q8IYS2 634 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 SHCBP1Q8NEM2 672 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 CHST13Q8NET6 341 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 OPTNQ96CV9 577 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 FAM163AQ96GL9 167 aaPredicted RBP12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 TCF7L2Q9NQB0 619 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 DDX28Q9NUL7 540 aaKnown RBP12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 DPP3Q9NY33 737 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 RUVBL2Q9Y230 463 aaKnown RBP12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 NFIBO00712 420 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 ANXA9O76027 345 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 FGRP09769 529 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 AGAP9Q5VTM2 703 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 CCDC33Q8N5R6 958 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 CERKQ8TCT0 537 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 CCDC126Q96EE4 140 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 TTYH3Q9C0H2 523 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 KCNQ5Q9NR82 932 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 CYP3A7-CYP3A51PA0A087WV96 503 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 SUPT3HB4E1H0 165 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 CYP3A7P24462 503 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 SOX10P56693 466 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 VPS72Q15906 364 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 SV2CQ496J9 727 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 FAM71AQ8IYT1 594 aa12.62□□□□□ -0.39
NPC1L1-204ENST00000546276 RFWD2Q8NHY2 731 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms