RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 TMEM174Q8WUU8 243 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 OVCA2Q8WZ82 227 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 P2RY11Q96G91 374 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 MMS19Q96T76 1030 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 ZDHHC4Q9NPG8 344 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 CFAP97Q9P2B7 532 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 EVLQ9UI08 416 aaPredicted RBP13.36□□□□□ -0.27
COPS7A-221ENST00000546229 FAM208BQ5VWN6 2430 aa13.36□□□□□ -0.27
COPS7A-221ENST00000546229 CACNA1EQ15878 2313 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 E2F8A0AVK6 867 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 HOXC11O43248 304 aaPredicted RBP13.35□□□□□ -0.27
COPS7A-221ENST00000546229 KLRC4O43908 158 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 KAT7O95251 611 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 YEATS4O95619 227 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 ADH5P11766 374 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 ANXA13P27216 316 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 TUBP50607 506 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 CYP2J2P51589 502 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 SLC5A3P53794 718 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 SNRPFP62306 86 aaKnown RBP13.35□□□□□ -0.27
COPS7A-221ENST00000546229 ASIC1P78348 528 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 PSMD2Q13200 908 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 HSF5Q4G112 596 aaPredicted RBP13.35□□□□□ -0.27
COPS7A-221ENST00000546229 LY6G5CQ5SRR4 150 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 EMC10Q5UCC4 262 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 STXBP4Q6ZWJ1 553 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 C11orf74Q86VG3 221 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 NELFCDQ8IXH7 590 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 FUKQ8N0W3 1084 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 XXYLT1Q8NBI6 393 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 RDH13Q8NBN7 331 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 TXNDC5Q8NBS9 432 aaKnown RBP13.35□□□□□ -0.27
COPS7A-221ENST00000546229 SCAMP5Q8TAC9 235 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 ELMO3Q96BJ8 720 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 CCDC127Q96BQ5 260 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 DHX58Q96C10 678 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 KCNK16Q96T55 309 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 DMAC2Q9NW81 257 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 EHD2Q9NZN4 543 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 HMGXB4Q9UGU5 601 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 DSPP15924 2871 aaKnown RBP13.35□□□□□ -0.27
COPS7A-221ENST00000546229 NBEAQ8NFP9 2946 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 CEP192Q8TEP8 1941 aa13.35□□□□□ -0.27
COPS7A-221ENST00000546229 LRRIQ3A6PVS8 624 aaPredicted RBP13.34□□□□□ -0.27
COPS7A-221ENST00000546229 CUTAO60888 179 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 BEST1O76090 585 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 KLF8O95600 359 aaPredicted RBP13.34□□□□□ -0.27
COPS7A-221ENST00000546229 KCNA4P22459 653 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 ATICP31939 592 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 PTGER3P43115 390 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 CDH8P55286 799 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 KDSRQ06136 332 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 STK38Q15208 465 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 USP39Q53GS9 565 aaKnown RBP13.34□□□□□ -0.27
COPS7A-221ENST00000546229 C1orf220Q5T0J3 134 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 MIB1Q86YT6 1006 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 BBS7Q8IWZ6 715 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 NUP93Q8N1F7 819 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 KIAA0895Q8NCT3 520 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 OR6B3Q8NGW1 331 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 CCDC26Q8TAB7 109 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 PARD3BQ8TEW8 1205 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 RLN3Q8WXF3 142 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 SLITRK1Q96PX8 696 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 PNKPQ96T60 521 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 SMOQ99835 787 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 SNX25Q9H3E2 840 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 CCSER2Q9H7U1 834 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 MAGEF1Q9HAY2 307 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 CSNK1G1Q9HCP0 422 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 TMEM74BQ9NUR3 256 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 LOC400499M0QZD8 3231 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 PI4KAP42356 2102 aa13.34□□□□□ -0.27
COPS7A-221ENST00000546229 A8MXQ7 604 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 SLC9A3R1O14745 358 aaPredicted RBP13.33□□□□□ -0.28
COPS7A-221ENST00000546229 TRIM24O15164 1050 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 RTN3O95197 1032 aaPredicted RBP13.33□□□□□ -0.28
COPS7A-221ENST00000546229 TOP3BO95985 862 aaKnown RBP13.33□□□□□ -0.28
COPS7A-221ENST00000546229 ADH1CP00326 375 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 C4BPAP04003 597 aaKnown RBP13.33□□□□□ -0.28
COPS7A-221ENST00000546229 PROS1P07225 676 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 MBL2P11226 248 aaPredicted RBP13.33□□□□□ -0.28
COPS7A-221ENST00000546229 TNNI1P19237 187 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 CSRP1P21291 193 aaKnown RBP13.33□□□□□ -0.28
COPS7A-221ENST00000546229 YWHAQP27348 245 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 GBP1P32455 592 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 TIE1P35590 1138 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 GRIA2P42262 883 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 TNFRSF4P43489 277 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 NOVA1P51513 510 aaKnown RBP13.33□□□□□ -0.28
COPS7A-221ENST00000546229 TNNC1P63316 161 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 IRX4P78413 519 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 ZNF252P-AS1Q0IIN9 211 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 CUL4BQ13620 913 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 SH3PXD2AQ5TCZ1 1133 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 HS2ST1Q7LGA3 356 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 CYP2U1Q7Z449 544 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 DDX42Q86XP3 938 aaKnown RBP eCLIP13.33□□□□□ -0.28
COPS7A-221ENST00000546229 PDZD8Q8NEN9 1154 aa13.33□□□□□ -0.28
COPS7A-221ENST00000546229 GATA6Q92908 595 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms