RNA–Protein interactions for RNA: ENST00000546120.2

UBC-213, Transcript of ubiquitin C, human

TSL 5 BASIC

Gene UBC, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBC-213	ENST00000546120	DUS1L	Q6P1R4	473 aa	Known RBP	10.57	□□□□□ -0.72
UBC-213	ENST00000546120	TMEM53	Q6P2H8	277 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	C1orf186	Q6ZWK4	172 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	GPR141	Q7Z602	305 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	SLC15A3	Q8IY34	581 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	XXYLT1	Q8NBI6	393 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	GOLM1	Q8NBJ4	401 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	CRYGN	Q8WXF5	182 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	SLC5A5	Q92911	643 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	GJA10	Q969M2	543 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	DOK1	Q99704	481 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	HGH1	Q9BTY7	390 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	YIPF2	Q9BWQ6	316 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	FGFBP2	Q9BYJ0	223 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	KANSL2	Q9H9L4	492 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	TMEM165	Q9HC07	324 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	FBXO6	Q9NRD1	293 aa	Predicted RBP	10.57	□□□□□ -0.72
UBC-213	ENST00000546120	TMEM260	Q9NX78	707 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	TMOD2	Q9NZR1	351 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	10.57	□□□□□ -0.72
UBC-213	ENST00000546120	TRPC5	Q9UL62	973 aa	Predicted RBP	10.57	□□□□□ -0.72
UBC-213	ENST00000546120	INPP5F	Q9Y2H2	1132 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	AP4B1	Q9Y6B7	739 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	SCN7A	Q01118	1682 aa		10.57	□□□□□ -0.72
UBC-213	ENST00000546120	DENND3	A2RUS2	1198 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	FUOM	A2VDF0	154 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	USP17L3	A6NCW0	530 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	USP17L4	A6NCW7	530 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	SLCO1B7	G3V0H7	640 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	KLHL41	O60662	606 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	DNAJB5	O75953	348 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	PGM3	O95394	542 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	BPGM	P07738	259 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	WEE2	P0C1S8	567 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	USP17L8	P0C7I0	530 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	MCF2	P10911	925 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	UNG	P13051	313 aa	Predicted RBP	10.56	□□□□□ -0.72
UBC-213	ENST00000546120	CDH3	P22223	829 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	PEX2	P28328	305 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	AQP5	P55064	265 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	ADCY1	Q08828	1119 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	OVGP1	Q12889	678 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	TUBA3C	Q13748	450 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	PIGH	Q14442	188 aa	Predicted RBP	10.56	□□□□□ -0.72
UBC-213	ENST00000546120	TNIP1	Q15025	636 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	C15orf52	Q6ZUT6	534 aa	Known RBP	10.56	□□□□□ -0.72
UBC-213	ENST00000546120	USP17L1	Q7RTZ2	530 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	PHF13	Q86YI8	300 aa	Predicted RBP	10.56	□□□□□ -0.72
UBC-213	ENST00000546120	TREML1	Q86YW5	311 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	THNSL1	Q8IYQ7	743 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	GSTCD	Q8NEC7	633 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	ZNF526	Q8TF50	670 aa	Predicted RBP	10.56	□□□□□ -0.72
UBC-213	ENST00000546120	SLC20A1	Q8WUM9	679 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	THAP11	Q96EK4	314 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	DUS3L	Q96G46	650 aa	Known RBP	10.56	□□□□□ -0.72
UBC-213	ENST00000546120	CNDP1	Q96KN2	507 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	ACAP3	Q96P50	834 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	SRPK1	Q96SB4	655 aa	Known RBP	10.56	□□□□□ -0.72
UBC-213	ENST00000546120	PCDHB18P	Q96TA0	734 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	POP1	Q99575	1024 aa	Known RBP	10.56	□□□□□ -0.72
UBC-213	ENST00000546120	HSD17B14	Q9BPX1	270 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	SENP7	Q9BQF6	1050 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	ZNF518B	Q9C0D4	1074 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	TMEM8A	Q9HCN3	771 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	DDX18	Q9NVP1	670 aa	Known RBP	10.56	□□□□□ -0.72
UBC-213	ENST00000546120	ARHGEF38	Q9NXL2	777 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	MTMR4	Q9NYA4	1195 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	HESX1	Q9UBX0	185 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	MID2	Q9UJV3	735 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	SYNPO2	Q9UMS6	1093 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	CDY2A	Q9Y6F7	541 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	CDY1	Q9Y6F8	540 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	SLIT2	O94813	1529 aa		10.56	□□□□□ -0.72
UBC-213	ENST00000546120	FAM237B	A0A1B0GVD1	139 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	CLIC2	O15247	247 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	CHAD	O15335	359 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	ADCY6	O43306	1168 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	KDM1A	O60341	852 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	SNAP91	O60641	907 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	SGPL1	O95470	568 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	FGFR1	P11362	822 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	CYP2C9	P11712	490 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	BGN	P21810	368 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	GLRA2	P23416	452 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	L1CAM	P32004	1257 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	SREBF1	P36956	1147 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	GYG1	P46976	350 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	CCT8	P50990	548 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	GPX6	P59796	221 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	ARPC4	P59998	168 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	PFKP	Q01813	784 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	RIPPLY1	Q0D2K3	151 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	BST1	Q10588	318 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	GRSF1	Q12849	480 aa	Known RBP eCLIP	10.55	□□□□□ -0.72
UBC-213	ENST00000546120	ACAP1	Q15027	740 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	RGS21	Q2M5E4	152 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	SPATS1	Q496A3	300 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	TFDP3	Q5H9I0	405 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	SUSD4	Q5VX71	490 aa		10.55	□□□□□ -0.72
UBC-213	ENST00000546120	PLEKHA7	Q6IQ23	1121 aa		10.55	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms