RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 KDELR1P24390 212 aa14.78□□□□□ -0.04
SRP54-202ENST00000546080 ZNF132P52740 706 aa14.78□□□□□ -0.04
SRP54-202ENST00000546080 MRPS5P82675 430 aaKnown RBP14.78□□□□□ -0.04
SRP54-202ENST00000546080 SLC25A11Q02978 314 aaKnown RBP14.78□□□□□ -0.04
SRP54-202ENST00000546080 MAP7Q14244 749 aa14.78□□□□□ -0.04
SRP54-202ENST00000546080 DACT2Q5SW24 774 aa14.78□□□□□ -0.04
SRP54-202ENST00000546080 SYCP2LQ5T4T6 812 aa14.78□□□□□ -0.04
SRP54-202ENST00000546080 LGSNQ5TDP6 509 aa14.78□□□□□ -0.04
SRP54-202ENST00000546080 ARMC3Q5W041 872 aa14.78□□□□□ -0.04
SRP54-202ENST00000546080 CES4AQ5XG92 561 aa14.78□□□□□ -0.04
SRP54-202ENST00000546080 SPATA24Q86W54 205 aa14.78□□□□□ -0.04
SRP54-202ENST00000546080 MCF2L2Q86YR7 1114 aa14.78□□□□□ -0.04
SRP54-202ENST00000546080 SLC26A7Q8TE54 656 aa14.78□□□□□ -0.04
SRP54-202ENST00000546080 H0YCG3 227 aa14.77□□□□□ -0.04
SRP54-202ENST00000546080 PENKP01210 267 aaPredicted RBP14.77□□□□□ -0.04
SRP54-202ENST00000546080 RBP3P10745 1247 aa14.77□□□□□ -0.04
SRP54-202ENST00000546080 AOC1P19801 751 aa14.77□□□□□ -0.04
SRP54-202ENST00000546080 CPOXP36551 454 aa14.77□□□□□ -0.04
SRP54-202ENST00000546080 FKBP1AP62942 108 aaKnown RBP14.77□□□□□ -0.04
SRP54-202ENST00000546080 GRM2Q14416 872 aa14.77□□□□□ -0.04
SRP54-202ENST00000546080 PABPC1LQ4VXU2 614 aaKnown RBP14.77□□□□□ -0.04
SRP54-202ENST00000546080 WDR78Q5VTH9 848 aa14.77□□□□□ -0.04
SRP54-202ENST00000546080 LPCAT4Q643R3 524 aa14.77□□□□□ -0.04
SRP54-202ENST00000546080 LCA5Q86VQ0 697 aa14.77□□□□□ -0.04
SRP54-202ENST00000546080 MCPH1Q8NEM0 835 aa14.77□□□□□ -0.04
SRP54-202ENST00000546080 RAB3IL1Q8TBN0 382 aa14.77□□□□□ -0.04
SRP54-202ENST00000546080 IMPG2Q9BZV3 1241 aa14.77□□□□□ -0.04
SRP54-202ENST00000546080 PNPLA8Q9NP80 782 aa14.77□□□□□ -0.04
SRP54-202ENST00000546080 TMCO1Q9UM00 188 aa14.77□□□□□ -0.04
SRP54-202ENST00000546080 TTLL3Q9Y4R7 772 aa14.77□□□□□ -0.04
SRP54-202ENST00000546080 ZNF541Q9H0D2 1346 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 A6NJR5 290 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 APOC4-APOC2K7ER74 178 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 CYB561D2O14569 222 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 LRCH4O75427 683 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 APOC2P02655 101 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 C6orf222P0C671 652 aaPredicted RBP14.77□□□□□ -0.05
SRP54-202ENST00000546080 PIM1P11309 404 aaPredicted RBP14.77□□□□□ -0.05
SRP54-202ENST00000546080 VAV1P15498 845 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 IL1R2P27930 398 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 CCNFP41002 786 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 GRIA2P42262 883 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 NRLP54845 237 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 AQP4P55087 323 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 XIAPP98170 497 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 SLC25A3Q00325 362 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 NCOA4Q13772 614 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 GPAT2Q6NUI2 795 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 CLEC4DQ8WXI8 215 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 MASTLQ96GX5 879 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 CGRRF1Q99675 332 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 EBF4Q9BQW3 602 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 ARHGAP28Q9P2N2 729 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 ZNF180Q9UJW8 692 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 SORCS3Q9UPU3 1222 aa14.77□□□□□ -0.05
SRP54-202ENST00000546080 MYH9P35579 1960 aaKnown RBP14.76□□□□□ -0.05
SRP54-202ENST00000546080 SMIM31A0A1B0GVY4 71 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 SPDYE2BA6NHP3 402 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 SDR42E2A6NKP2 422 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 TXNDC9O14530 226 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 SNNO75324 88 aaPredicted RBP14.76□□□□□ -0.05
SRP54-202ENST00000546080 CD48P09326 243 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 SPATA31D3P0C874 917 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 SPDYE6P0CI01 402 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 ROR1Q01973 937 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 WASHC5Q12768 1159 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 STX3Q13277 289 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 MSLNQ13421 630 aaPredicted RBP14.76□□□□□ -0.05
SRP54-202ENST00000546080 KCNJ11Q14654 390 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 MMEL1Q495T6 779 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 SPDYE2Q495Y8 402 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 ZNF394Q53GI3 561 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 CC2D2BQ6DHV5 1058 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 SPATA31D4Q6ZUB0 917 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 SATL1Q86VE3 508 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 KCTD6Q8NC69 237 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 SHKBP1Q8TBC3 707 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 PIP4K2CQ8TBX8 421 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 GDPD5Q8WTR4 605 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 JADE3Q92613 823 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 APBB2Q92870 758 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 FAF2Q96CS3 445 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 HIC2Q96JB3 615 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 ZNF518BQ9C0D4 1074 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 POLR3FQ9H1D9 316 aaPredicted RBP14.76□□□□□ -0.05
SRP54-202ENST00000546080 MKS1Q9NXB0 559 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 GABBR1Q9UBS5 961 aa14.76□□□□□ -0.05
SRP54-202ENST00000546080 COL2A1P02458 1487 aaPredicted RBP14.76□□□□□ -0.05
SRP54-202ENST00000546080 A0A0B4J269 797 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 TESPA1A2RU30 521 aaPredicted RBP14.75□□□□□ -0.05
SRP54-202ENST00000546080 AVILO75366 819 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 RFPL1O75677 317 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 DGAT1O75907 488 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 VCLP18206 1134 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 PEX2P28328 305 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 ABCD1P33897 745 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 RFC1P35251 1148 aaPredicted RBP14.75□□□□□ -0.05
SRP54-202ENST00000546080 EPHB1P54762 984 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 BMPR2Q13873 1038 aa14.75□□□□□ -0.05
SRP54-202ENST00000546080 PGM5Q15124 567 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms