RNA–Protein interactions for RNA: ENST00000546076.5

TSPAN11-204, Transcript of tetraspanin 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN11, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN11-204ENST00000546076 CDX4O14627 284 aaPredicted RBP16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 PSMA7O14818 248 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 KHNYNO15037 678 aaKnown RBP16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 TACC1O75410 805 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 BCKDHBP21953 392 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 CYP2F1P24903 491 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 IFNAR2P48551 515 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 MYL6P60660 151 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 DLG4P78352 724 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 FKBP3Q00688 224 aaKnown RBP16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 LRRC63Q05C16 580 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 NCOA4Q13772 614 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 ZNF77Q15935 545 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 SGSM1Q2NKQ1 1148 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 EML3Q32P44 896 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 ZACNQ401N2 412 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 USP39Q53GS9 565 aaKnown RBP16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 SV2AQ7L0J3 742 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 TAF4BQ92750 862 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 MMS19Q96T76 1030 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 ADAM33Q9BZ11 813 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 LINC00597Q9H2U6 94 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 TMEM9BQ9NQ34 198 aa16.27■□□□□ 0.2
TSPAN11-204ENST00000546076 USP17L7P0C7H9 530 aa16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 CEACAM1P13688 526 aa16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 WARSP23381 471 aaKnown RBP16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 GTF2H1P32780 548 aa16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 SEC13P55735 322 aa16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 TNNC1P63316 161 aa16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 IRX4P78413 519 aa16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 MORC3Q14149 939 aa16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 INTS6LQ5JSJ4 861 aaKnown RBP16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 ANKRD40Q6AI12 368 aa16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 FOXR2Q6PJQ5 311 aa16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 ZC3H3Q8IXZ2 948 aaKnown RBP16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 KBTBD7Q8WVZ9 684 aa16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 ATP2A3Q93084 1043 aa16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 ABCB6Q9NP58 842 aa16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 UXTQ9UBK9 157 aaPredicted RBP16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 CDH9Q9ULB4 789 aa16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 CEP295Q9C0D2 2601 aa16.26■□□□□ 0.19
TSPAN11-204ENST00000546076 ABCA7Q8IZY2 2146 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 TRAV19A0A0A6YYK7 116 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 NOL4O94818 638 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 EPB41P11171 864 aaKnown RBP16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 CSRP1P21291 193 aaKnown RBP16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 ACAT1P24752 427 aaKnown RBP16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 GNL1P36915 607 aaPredicted RBP16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 RPL10AP62906 217 aaKnown RBP16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 USP4Q13107 963 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 MAPRE1Q15691 268 aaKnown RBP16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 UAP1L1Q3KQV9 507 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 C2orf27AQ580R0 203 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 C1orf220Q5T0J3 134 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 ANO7Q6IWH7 933 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 FAM171BQ6P995 826 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 CYP2U1Q7Z449 544 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 OSTM1Q86WC4 334 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 ARL14EPQ8N8R7 260 aaPredicted RBP16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 TRIML1Q8N9V2 468 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 SH3RF2Q8TEC5 729 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 USP33Q8TEY7 942 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 FUBP3Q96I24 572 aaKnown RBP eCLIP16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 MYRFLQ96LU7 910 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 PKMYT1Q99640 499 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 SCNM1Q9BWG6 230 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 GCNT4Q9P109 453 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 FAM208BQ5VWN6 2430 aa16.25■□□□□ 0.19
TSPAN11-204ENST00000546076 C2orf78A6NCI8 922 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 K7EQS6 105 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 SLC16A3O15427 465 aaKnown RBP16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 STX10O60499 249 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 VNN1O95497 513 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 CKMP06732 381 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 P4HA1P13674 534 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 BMP6P22004 513 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 LMO2P25791 158 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 DHPSP49366 369 aaPredicted RBP16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 NR1H3Q13133 447 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 CCDC142Q17RM4 750 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 ZNF699Q32M78 642 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 CFAP221Q4G0U5 840 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 ZNF667Q5HYK9 610 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 ISM2Q6H9L7 571 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 C11orf74Q86VG3 221 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 RASSF3Q86WH2 238 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 TTC30AQ86WT1 665 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 CCDC33Q8N5R6 958 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 DEFB124Q8NES8 71 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 PIGKQ92643 395 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 GATA6Q92908 595 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 TRMT2BQ96GJ1 504 aaKnown RBP16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 SNX25Q9H3E2 840 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 KIAA1468Q9P260 1216 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 NXF1Q9UBU9 619 aaKnown RBP16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 GTF3C4Q9UKN8 822 aa16.24■□□□□ 0.19
TSPAN11-204ENST00000546076 SPEGQ15772 3267 aa16.23■□□□□ 0.19
TSPAN11-204ENST00000546076 BICDL2A1A5D9 508 aa16.23■□□□□ 0.19
TSPAN11-204ENST00000546076 PPP1R3GB7ZBB8 358 aa16.23■□□□□ 0.19
TSPAN11-204ENST00000546076 ASS1P00966 412 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms