RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 TMEM110Q86TL2 294 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 ERICH1Q86X53 443 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 PHF13Q86YI8 300 aaPredicted RBP11.33□□□□□ -0.6
PAAF1-216ENST00000546039 TMC8Q8IU68 726 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 ZDHHC17Q8IUH5 632 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 C12orf76Q8N812 135 aaPredicted RBP11.33□□□□□ -0.6
PAAF1-216ENST00000546039 STKLD1Q8NE28 680 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 SCAMP5Q8TAC9 235 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 CPA5Q8WXQ8 436 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 OVCA2Q8WZ82 227 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 C18orf8Q96DM3 657 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 TRIM11Q96F44 468 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 VCPIP1Q96JH7 1222 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 SLITRK1Q96PX8 696 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 GCNAQ96QF7 691 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 CORO1BQ9BR76 489 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 ADAM7Q9H2U9 754 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 AVENQ9NQS1 362 aaPredicted RBP11.33□□□□□ -0.6
PAAF1-216ENST00000546039 CD207Q9UJ71 328 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 NAGPAQ9UK23 515 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 STRIP2Q9ULQ0 834 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 MAGED2Q9UNF1 606 aaPredicted RBP11.33□□□□□ -0.6
PAAF1-216ENST00000546039 SCML2Q9UQR0 700 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 USP3Q9Y6I4 520 aa11.33□□□□□ -0.6
PAAF1-216ENST00000546039 KIF26AQ9ULI4 1882 aaPredicted RBP11.33□□□□□ -0.6
PAAF1-216ENST00000546039 ZBED1O96006 694 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 ERBB2P04626 1255 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 RHOP08100 348 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 LCP1P13796 627 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 CDC25CP30307 473 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 SCNN1AP37088 669 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 MTHFRP42898 656 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 PPP3CCP48454 512 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 GSCP56915 257 aaPredicted RBP11.32□□□□□ -0.6
PAAF1-216ENST00000546039 USP46P62068 366 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 C1QBPQ07021 282 aaKnown RBP11.32□□□□□ -0.6
PAAF1-216ENST00000546039 DLX2Q07687 328 aaPredicted RBP11.32□□□□□ -0.6
PAAF1-216ENST00000546039 PABPC1LQ4VXU2 614 aaKnown RBP11.32□□□□□ -0.6
PAAF1-216ENST00000546039 CYP4A22Q5TCH4 519 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 PM20D1Q6GTS8 502 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 ALKBH5Q6P6C2 394 aaKnown RBP11.32□□□□□ -0.6
PAAF1-216ENST00000546039 MMS22LQ6ZRQ5 1243 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 TOGARAM2Q6ZUX3 1019 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 PDZD4Q76G19 769 aaPredicted RBP11.32□□□□□ -0.6
PAAF1-216ENST00000546039 TMEM139Q8IV31 216 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 ARHGAP18Q8N392 663 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 SMRP1Q8NCR6 262 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 MAFAQ8NHW3 353 aaPredicted RBP11.32□□□□□ -0.6
PAAF1-216ENST00000546039 PPM1EQ8WY54 764 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 IRGQQ8WZA9 623 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 RIPOR3Q96MK2 946 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 PPP1R9BQ96SB3 815 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 C11orf70Q9BRQ4 267 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 LRRC3Q9BY71 257 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 ULBP1Q9BZM6 244 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 ISCUQ9H1K1 167 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 ZNF334Q9HCZ1 680 aaPredicted RBP11.32□□□□□ -0.6
PAAF1-216ENST00000546039 LUC7LQ9NQ29 371 aaKnown RBP11.32□□□□□ -0.6
PAAF1-216ENST00000546039 HCFC1R1Q9NWW0 138 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 ADAM22Q9P0K1 906 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 WDR35Q9P2L0 1181 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 DNMT3BQ9UBC3 853 aaKnown RBP11.32□□□□□ -0.6
PAAF1-216ENST00000546039 NENFQ9UMX5 172 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 COG5Q9UP83 839 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 CLUHO75153 1309 aa11.32□□□□□ -0.6
PAAF1-216ENST00000546039 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-216ENST00000546039 SOWAHDA6NJG2 315 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 TMCO5BA8MYB1 307 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 PIK3R2O00459 728 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 ZNF197O14709 1029 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 PAPSS1O43252 624 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-216ENST00000546039 GABBR2O75899 941 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 IPO7O95373 1038 aaKnown RBP11.31□□□□□ -0.6
PAAF1-216ENST00000546039 USP17L7P0C7H9 530 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 MYBL1P10243 752 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 MYL4P12829 197 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 GABRR2P28476 465 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 PSEN1P49768 467 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 DAOAP59103 153 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 MRPS5P82675 430 aaKnown RBP11.31□□□□□ -0.6
PAAF1-216ENST00000546039 GFPT1Q06210 699 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-216ENST00000546039 TAF10Q12962 218 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 PTP4A2Q12974 167 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 CCDC122Q5T0U0 273 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 C10orf76Q5T2E6 689 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 OR6B2Q6IFH4 312 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 FAM183BPQ6ZVS7 135 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 GRASPQ7Z6J2 395 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-216ENST00000546039 MON1AQ86VX9 555 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 XYLT1Q86Y38 959 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 LRRC8AQ8IWT6 810 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 MCOLN2Q8IZK6 566 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 HS6ST3Q8IZP7 471 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 HLA-CQ95604 372 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 NECTIN4Q96NY8 510 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 TRIM62Q9BVG3 475 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 APOL5Q9BWW9 433 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 S1PR5Q9H228 398 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 IL21Q9HBE4 155 aa11.31□□□□□ -0.6
PAAF1-216ENST00000546039 TLR8Q9NR97 1041 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms