RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 ATP6V1G2O95670 118 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 KCNA2P16389 499 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 RGS4P49798 205 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 EFEMP1Q12805 493 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 PLCL1Q15111 1095 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 PCSK7Q16549 785 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 ZNF284Q2VY69 593 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 TTI2Q6NXR4 508 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 PALB2Q86YC2 1186 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 C7orf61Q8IZ16 206 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 REPS2Q8NFH8 660 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 NCLNQ969V3 563 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 NR1H4Q96RI1 486 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-218ENST00000545889 APBA2Q99767 749 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 TRAIPQ9BWF2 469 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 RSAD1Q9HA92 442 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 GTSE1Q9NYZ3 720 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 ZMYND8Q9ULU4 1186 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-218ENST00000545889 PCDHA13Q9Y5I0 950 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 EIF3DO15371 548 aaKnown RBP eCLIP8.93□□□□□ -0.98
CLIP1-218ENST00000545889 HMGCRP04035 888 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 GFAPP14136 432 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 TUFMP49411 452 aaKnown RBP8.93□□□□□ -0.98
CLIP1-218ENST00000545889 SESN2P58004 480 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-218ENST00000545889 MTA1Q13330 715 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 NCAPHQ15003 741 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 ZBTB41Q5SVQ8 909 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 C1orf186Q6ZWK4 172 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 ANO5Q75V66 913 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 CBWD2Q8IUF1 395 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 MYCBPAPQ8TBZ2 947 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 DNAJC19Q96DA6 116 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 CYFIP2Q96F07 1278 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 ZMAT2Q96NC0 199 aaKnown RBP8.93□□□□□ -0.98
CLIP1-218ENST00000545889 CINPQ9BW66 212 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-218ENST00000545889 SAYSD1Q9NPB0 183 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 SELENONQ9NZV5 590 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 PCDHB5Q9Y5E4 795 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 GOLGA8MH3BSY2 632 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 KLRC4O43908 158 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 NDUFS2O75306 463 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 ATP4AP20648 1035 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 SCTRP47872 440 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 PHEXP78562 749 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 DR1Q01658 176 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 DHX9Q08211 1270 aaKnown RBP8.93□□□□□ -0.98
CLIP1-218ENST00000545889 COBLL1Q53SF7 1204 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 CST9Q5W186 159 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 UBA3Q8TBC4 463 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 KRT82Q9NSB4 513 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 INTS9Q9NV88 658 aaKnown RBP8.93□□□□□ -0.98
CLIP1-218ENST00000545889 EPS15L1Q9UBC2 864 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 RAB21Q9UL25 225 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 C2CD2Q9Y426 696 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 PDZK1P1A8MUH7 402 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 NDUFA10O95299 355 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 BAG2O95816 211 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 SLCO1A2P46721 670 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 CCDC149Q6ZUS6 474 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 ELOA2Q8IYF1 753 aaPredicted RBP8.93□□□□□ -0.98
CLIP1-218ENST00000545889 PPM1NQ8N819 430 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 ELMO3Q96BJ8 720 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 MAML3Q96JK9 1138 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 TEX12Q9BXU0 123 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 FGFBP2Q9BYJ0 223 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 TRPV2Q9Y5S1 764 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 ADGRG1Q9Y653 693 aa8.93□□□□□ -0.98
CLIP1-218ENST00000545889 LRRC53A6NM62 1247 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 EXTL3O43909 919 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 MFAP3LO75121 409 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 SUPT3HO75486 399 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 SLC9A1P19634 815 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 LHX1P48742 406 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 ARHGDIAP52565 204 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 ART3Q13508 389 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 FASTKD1Q53R41 847 aaKnown RBP8.92□□□□□ -0.98
CLIP1-218ENST00000545889 ARSHQ5FYA8 562 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 FAM47EQ6ZV65 393 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 DSG4Q86SJ6 1040 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 OTUB1Q96FW1 271 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-218ENST00000545889 AP1M1Q9BXS5 423 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 MIR1-1HGQ9H1L0 117 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 RBM47A0AV96 593 aaKnown RBP8.92□□□□□ -0.98
CLIP1-218ENST00000545889 CCDC78A2IDD5 438 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 WDR91A4D1P6 747 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 SLC26A4O43511 780 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 NCF2P19878 526 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-218ENST00000545889 EPHB4P54760 987 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 MKRN4PQ13434 485 aaPredicted RBP8.92□□□□□ -0.98
CLIP1-218ENST00000545889 KBTBD12Q3ZCT8 623 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 SPDYE7PQ495Y7 208 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 CWF19L1Q69YN2 538 aaKnown RBP8.92□□□□□ -0.98
CLIP1-218ENST00000545889 PHLDB3Q6NSJ2 640 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 FRMD5Q7Z6J6 570 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 SUSD6Q92537 303 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 GORASP1Q9BQQ3 440 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 EFHD1Q9BUP0 239 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 R3HDMLQ9H3Y0 253 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 HIPK3Q9H422 1215 aa8.92□□□□□ -0.98
CLIP1-218ENST00000545889 WDCPQ9H6R7 721 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms