RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 TTYH3Q9C0H2 523 aa4.73□□□□□ -1.65
SNHG1-222ENST00000545308 SIK2Q9H0K1 926 aa4.73□□□□□ -1.65
SNHG1-222ENST00000545308 PARPBPQ9NWS1 579 aa4.73□□□□□ -1.65
SNHG1-222ENST00000545308 DNMT3BQ9UBC3 853 aaKnown RBP4.73□□□□□ -1.65
SNHG1-222ENST00000545308 HECAQ9UBI9 543 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-222ENST00000545308 LPAR3Q9UBY5 353 aa4.73□□□□□ -1.65
SNHG1-222ENST00000545308 HERC5Q9UII4 1024 aaKnown RBP4.73□□□□□ -1.65
SNHG1-222ENST00000545308 FEM1BQ9UK73 627 aa4.73□□□□□ -1.65
SNHG1-222ENST00000545308 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.73□□□□□ -1.65
SNHG1-222ENST00000545308 MTO1Q9Y2Z2 717 aaKnown RBP4.73□□□□□ -1.65
SNHG1-222ENST00000545308 DTNAQ9Y4J8 743 aa4.73□□□□□ -1.65
SNHG1-222ENST00000545308 ABCA8O94911 1581 aa4.73□□□□□ -1.65
SNHG1-222ENST00000545308 TTC37Q6PGP7 1564 aa4.73□□□□□ -1.65
SNHG1-222ENST00000545308 CTTNBP2Q8WZ74 1663 aa4.73□□□□□ -1.65
SNHG1-222ENST00000545308 POLRMTO00411 1230 aaKnown RBP4.72□□□□□ -1.65
SNHG1-222ENST00000545308 FCHO1O14526 889 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 RRP9O43818 475 aaKnown RBP4.72□□□□□ -1.65
SNHG1-222ENST00000545308 USP1O94782 785 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 INMTO95050 263 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 ITGA2BP08514 1039 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 CYP2C9P11712 490 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 XRCC6P12956 609 aaKnown RBP eCLIP4.72□□□□□ -1.65
SNHG1-222ENST00000545308 IDEP14735 1019 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 JUPP14923 745 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 TPH1P17752 444 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 CHRM3P20309 590 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 MST1P26927 711 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 CST5P28325 142 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-222ENST00000545308 MAN1A1P33908 653 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 ADD2P35612 726 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 TUBP50607 506 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 ZNF134P52741 427 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 CHN2P52757 468 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 PRKAA2P54646 552 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 MPP1Q00013 466 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 IQCB1Q15051 598 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 ZNF750Q32MQ0 723 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 METRNLQ641Q3 311 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 EFCAB12Q6NXP0 572 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 PCSK4Q6UW60 755 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 C1orf122Q6ZSJ8 110 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 FAM83AQ86UY5 434 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 KRT73Q86Y46 540 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 GATAD2AQ86YP4 633 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 SYT12Q8IV01 421 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 DNAJC10Q8IXB1 793 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 OR52N2Q8NGI0 321 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 SCAMP5Q8TAC9 235 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 RUBCNQ92622 972 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 ZG16BQ96DA0 208 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 TMEM176AQ96HP8 235 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 PHACTR3Q96KR7 559 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 MPHOSPH9Q99550 1183 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 CPPED1Q9BRF8 314 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-222ENST00000545308 DDX23Q9BUQ8 820 aaKnown RBP4.72□□□□□ -1.65
SNHG1-222ENST00000545308 TMX4Q9H1E5 349 aaPredicted RBP4.72□□□□□ -1.65
SNHG1-222ENST00000545308 PABPC3Q9H361 631 aaKnown RBP4.72□□□□□ -1.65
SNHG1-222ENST00000545308 SPON1Q9HCB6 807 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 KIF17Q9P2E2 1029 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 CDYLQ9Y232 598 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 DMRT1Q9Y5R6 373 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 CDY1Q9Y6F8 540 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 ATP10AO60312 1499 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 ATP10BO94823 1461 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 RICTORQ6R327 1708 aa4.72□□□□□ -1.65
SNHG1-222ENST00000545308 CCDC78A2IDD5 438 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 HMX3A6NHT5 357 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 PRR5-ARHGAP8B1AHC4 643 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 DNPH1O43598 174 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 ACTL6BO94805 426 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 PEX11BO96011 259 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 CD4P01730 458 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 ARP10275 920 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 LILRA4P59901 499 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 CUL4BQ13620 913 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 RRP1BQ14684 758 aaKnown RBP4.71□□□□□ -1.66
SNHG1-222ENST00000545308 INSCQ1MX18 579 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 TRIM71Q2Q1W2 868 aaKnown RBP4.71□□□□□ -1.66
SNHG1-222ENST00000545308 HYIQ5T013 277 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 FAXCQ5TGI0 409 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 MANEALQ5VSG8 457 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 TAF2Q6P1X5 1199 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 DRICH1Q6PGQ1 229 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-222ENST00000545308 KLHL17Q6TDP4 642 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 SLC30A10Q6XR72 485 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 ELOA2Q8IYF1 753 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-222ENST00000545308 ULK2Q8IYT8 1036 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 ESX1Q8N693 406 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 NUP133Q8WUM0 1156 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 HERVK_113Q902F9 699 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 MARS2Q96GW9 593 aaKnown RBP4.71□□□□□ -1.66
SNHG1-222ENST00000545308 TRIB1Q96RU8 372 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 SEC62Q99442 399 aaKnown RBP4.71□□□□□ -1.66
SNHG1-222ENST00000545308 AGAP2Q99490 1192 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 NEU1Q99519 415 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 PRRX2Q99811 253 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 PYM1Q9BRP8 204 aaKnown RBP4.71□□□□□ -1.66
SNHG1-222ENST00000545308 SLC46A2Q9BY10 475 aa4.71□□□□□ -1.66
SNHG1-222ENST00000545308 TP63Q9H3D4 680 aaPredicted RBP4.71□□□□□ -1.66
SNHG1-222ENST00000545308 SMOC2Q9H3U7 446 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms