RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-223	ENST00000544669	OTOA	Q7RTW8	1153 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	UNC93A	Q86WB7	457 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	LRRC6	Q86X45	466 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	CCNJL	Q8IV13	435 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	SULF1	Q8IWU6	871 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	UNC45B	Q8IWX7	931 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	HACE1	Q8IYU2	909 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	ANKRD13A	Q8IZ07	590 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	TCP10L	Q8TDR4	215 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	TBC1D31	Q96DN5	1066 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	SIKE1	Q9BRV8	207 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	ELOVL4	Q9GZR5	314 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	CXorf56	Q9H5V9	222 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	MKS1	Q9NXB0	559 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	HESX1	Q9UBX0	185 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	CHKB	Q9Y259	395 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	STK38L	Q9Y2H1	464 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669	TEX264	Q9Y6I9	313 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669		A0A0G2JMZ2	1700 aa		13.59	□□□□□ -0.23
CPSF7-223	ENST00000544669		A0A1W2PPM1	405 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	GOLGA8M	H3BSY2	632 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	C22orf31	O95567	290 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	DHRS4L1	P0CG22	281 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	BCAR1	P56945	870 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	OSTN	P61366	133 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	CDK16	Q00536	496 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	MGAT5	Q09328	741 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	ANKRD20A3	Q5VUR7	823 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	PRAMEF18	Q5VWM3	479 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	FAM91A1	Q658Y4	838 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	ZNF410	Q86VK4	478 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	MAB21L3	Q8N8X9	362 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	TRPM4	Q8TD43	1214 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	AGAP11	Q8TF27	550 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	MZB1	Q8WU39	189 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	RXFP2	Q8WXD0	754 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	TSSK1B	Q9BXA7	367 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	TLE6	Q9H808	572 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669	PNMA3	Q9UL41	463 aa		13.58	□□□□□ -0.24
CPSF7-223	ENST00000544669		I3L4J1	428 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	GPR25	O00155	361 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	PPP1R12A	O14974	1030 aa	Predicted RBP	13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	KIF1C	O43896	1103 aa	Known RBP	13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	ZBED1	O96006	694 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	NFIC	P08651	508 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	ELK3	P41970	407 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	ARFIP2	P53365	341 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	GDF10	P55107	478 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	YWHAG	P61981	247 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	KRT72	Q14CN4	511 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	TBCC	Q15814	346 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	ANKRD22	Q5VYY1	191 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	EEF1DP3	Q658K8	133 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	CHADL	Q6NUI6	762 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	KIAA0319L	Q8IZA0	1049 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	EMC1	Q8N766	993 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	EMID1	Q96A84	441 aa	Predicted RBP	13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	ACSF2	Q96CM8	615 aa	Predicted RBP	13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	XAB2	Q9HCS7	855 aa	Known RBP	13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	DPP3	Q9NY33	737 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	CYTH4	Q9UIA0	394 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	GGT7	Q9UJ14	662 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	KCNH4	Q9UQ05	1017 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	TCRBV9S1A1T	A0A576	114 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	SOCS7	O14512	581 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	COPE	O14579	308 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	LIN7A	O14910	233 aa	Predicted RBP	13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	TPSB2	P20231	275 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	GRM5	P41594	1212 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	ACADSB	P45954	432 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	CDH8	P55286	799 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	CCNA1	P78396	465 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	SLC6A3	Q01959	620 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	TPSAB1	Q15661	275 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	STXBP5	Q5T5C0	1151 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	SLC9A4	Q6AI14	798 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	CAPN12	Q6ZSI9	719 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	EEPD1	Q7L9B9	569 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	TMEM110	Q86TL2	294 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	PSTK	Q8IV42	348 aa	Known RBP	13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	TEX9	Q8N6V9	391 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	LRRC52	Q8N7C0	313 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	SLC4A5	Q9BY07	1137 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	MMADHC	Q9H3L0	296 aa	Predicted RBP	13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	PDZD7	Q9H5P4	517 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	FAM96A	Q9H5X1	160 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	SMYD3	Q9H7B4	428 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	GBA2	Q9HCG7	927 aa	Predicted RBP	13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	VTA1	Q9NP79	307 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	RAB6B	Q9NRW1	208 aa		13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	ADARB2	Q9NS39	739 aa	Known RBP	13.57	□□□□□ -0.24
CPSF7-223	ENST00000544669	FOXO6	A8MYZ6	492 aa		13.56	□□□□□ -0.24
CPSF7-223	ENST00000544669	HACD1	B0YJ81	288 aa		13.56	□□□□□ -0.24
CPSF7-223	ENST00000544669	B4GALT5	O43286	388 aa		13.56	□□□□□ -0.24
CPSF7-223	ENST00000544669	GCAT	O75600	419 aa		13.56	□□□□□ -0.24
CPSF7-223	ENST00000544669	TMEM63A	O94886	807 aa		13.56	□□□□□ -0.24
CPSF7-223	ENST00000544669	HAUS5	O94927	633 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms