RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 BYSLQ13895 437 aaKnown RBP4.48□□□□□ -1.69
SNHG1-220ENST00000544550 DMC1Q14565 340 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 TEAD2Q15562 447 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 TRIP6Q15654 476 aaKnown RBP4.48□□□□□ -1.69
SNHG1-220ENST00000544550 ARHGAP15Q53QZ3 475 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 JAKMIP3Q5VZ66 844 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 FBXW10Q5XX13 1052 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 ANKRD34AQ69YU3 496 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 PKN3Q6P5Z2 889 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 SLC23A3Q6PIS1 610 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 ANO5Q75V66 913 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 LPCAT2Q7L5N7 544 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 OTUD6AQ7L8S5 288 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 FERMT3Q86UX7 667 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 LSRQ86X29 649 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-220ENST00000544550 ARID3BQ8IVW6 561 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-220ENST00000544550 MB21D2Q8IYB1 491 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-220ENST00000544550 AGGF1Q8N302 714 aaeCLIP4.48□□□□□ -1.69
SNHG1-220ENST00000544550 FAM169BQ8N8A8 192 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 C2CD4AQ8NCU7 369 aaPredicted RBP4.48□□□□□ -1.69
SNHG1-220ENST00000544550 TSTD1Q8NFU3 115 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 TTC8Q8TAM2 541 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 BICD2Q8TD16 824 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 PRPF31Q8WWY3 499 aaKnown RBP4.48□□□□□ -1.69
SNHG1-220ENST00000544550 RUFY2Q8WXA3 655 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 RABGGTAQ92696 567 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 SLC5A5Q92911 643 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 CPB2Q96IY4 423 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 CEP170P1Q96L14 293 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 CNOT6LQ96LI5 555 aaKnown RBP4.48□□□□□ -1.69
SNHG1-220ENST00000544550 NACC1Q96RE7 527 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 PAAF1Q9BRP4 392 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 PI4K2AQ9BTU6 479 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 NFKBIZQ9BYH8 718 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 UNC45AQ9H3U1 944 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 DHX33Q9H6R0 707 aaKnown RBP4.48□□□□□ -1.69
SNHG1-220ENST00000544550 AKTIPQ9H8T0 292 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 C6orf50Q9HD87 102 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 AFF4Q9UHB7 1163 aaKnown RBP4.48□□□□□ -1.69
SNHG1-220ENST00000544550 ZMYM5Q9UJ78 669 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 FASNP49327 2511 aaKnown RBP4.48□□□□□ -1.69
SNHG1-220ENST00000544550 SPTBN2O15020 2390 aa4.48□□□□□ -1.69
SNHG1-220ENST00000544550 DOCK8Q8NF50 2099 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 COL4A2P08572 1712 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 ADAMTS20P59510 1910 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 TEX51A0A1B0GUA7 166 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 A0A1B0GUA9 196 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 TMEM150BA6NC51 233 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 SLC22A31A6NKX4 558 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 SH2B2O14492 632 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-220ENST00000544550 SYN3O14994 580 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 SMAD7O15105 426 aaKnown RBP4.47□□□□□ -1.69
SNHG1-220ENST00000544550 PRC1O43663 620 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 DNAJA2O60884 412 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 MOSPD3O75425 235 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 PSMD10O75832 226 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 ALX3O95076 343 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 STBD1O95210 358 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 NPTXRO95502 500 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 PRKCBP05771 671 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 PGRP06401 933 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 ARF4P18085 180 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-220ENST00000544550 RXRAP19793 462 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 TKTP29401 623 aaKnown RBP4.47□□□□□ -1.69
SNHG1-220ENST00000544550 HOXC13P31276 330 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 QARSP47897 775 aaKnown RBP4.47□□□□□ -1.69
SNHG1-220ENST00000544550 USP11P51784 963 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 EPHB3P54753 998 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 ARPP19P56211 112 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 ETF1P62495 437 aaKnown RBP4.47□□□□□ -1.69
SNHG1-220ENST00000544550 CYP4A11Q02928 519 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 CFHR1Q03591 330 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 MBTD1Q05BQ5 628 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 SERINC3Q13530 473 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 RUNX3Q13761 415 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 DUOXA1Q1HG43 343 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 C20orf194Q5TEA3 1177 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 LYSMD4Q5XG99 296 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 PLA2G4FQ68DD2 849 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 PPP4R3AQ6IN85 833 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 FSTL4Q6MZW2 842 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 ZNF280DQ6N043 979 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 FDX2Q6P4F2 183 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 TOGARAM2Q6ZUX3 1019 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 RASSF3Q86WH2 238 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 MICU3Q86XE3 530 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 TMEFF1Q8IYR6 380 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 GALNT15Q8N3T1 639 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 ZNF843Q8N446 348 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 TAB3Q8N5C8 712 aaPredicted RBP4.47□□□□□ -1.69
SNHG1-220ENST00000544550 RPLP0P6Q8NHW5 317 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 EXOC6Q8TAG9 804 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 SHKBP1Q8TBC3 707 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 ZNF507Q8TCN5 953 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 TMEM143Q96AN5 459 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 LENG9Q96B70 501 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 CCDC136Q96JN2 1154 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 ZFYVE19Q96K21 471 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 P2RY13Q9BPV8 354 aa4.47□□□□□ -1.69
SNHG1-220ENST00000544550 SH2D3AQ9BRG2 576 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms