RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 A0A1B0GTH6 734 aa20.17■□□□□ 0.82
DDX55-211ENST00000544429 GABBR2O75899 941 aa20.17■□□□□ 0.82
DDX55-211ENST00000544429 RPL34P49207 117 aaKnown RBP20.17■□□□□ 0.82
DDX55-211ENST00000544429 UBXN1Q04323 297 aa20.17■□□□□ 0.82
DDX55-211ENST00000544429 SIGLEC14Q08ET2 396 aa20.17■□□□□ 0.82
DDX55-211ENST00000544429 DRAP1Q14919 205 aaPredicted RBP20.17■□□□□ 0.82
DDX55-211ENST00000544429 UBA3Q8TBC4 463 aa20.17■□□□□ 0.82
DDX55-211ENST00000544429 DEPDC1BQ8WUY9 529 aa20.17■□□□□ 0.82
DDX55-211ENST00000544429 USP13Q92995 863 aaPredicted RBP20.17■□□□□ 0.82
DDX55-211ENST00000544429 GMIPQ9P107 970 aa20.17■□□□□ 0.82
DDX55-211ENST00000544429 HEPACAM2A8MVW5 462 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 F8VZ95 297 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 ARNTLO00327 626 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 CYP26A1O43174 497 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 TEX33O43247 280 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 PNMA6AP0CW24 399 aaPredicted RBP20.16■□□□□ 0.82
DDX55-211ENST00000544429 TCF3P15923 654 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 PSMC3P17980 439 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 GNA15P30679 374 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 GPD2P43304 727 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 JAM2P57087 298 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 SLC8A3P57103 927 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 PM20D1Q6GTS8 502 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 TRIM67Q6ZTA4 783 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 BHLHA9Q7RTU4 235 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 SCML4Q8N228 414 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 ZNF276Q8N554 614 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 RIN3Q8TB24 985 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 CYP2S1Q96SQ9 504 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 RNF38Q9H0F5 515 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 FAM207AQ9NSI2 230 aaPredicted RBP20.16■□□□□ 0.82
DDX55-211ENST00000544429 TDP1Q9NUW8 608 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 OSER1Q9NX31 292 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 CHORDC1Q9UHD1 332 aaPredicted RBP20.16■□□□□ 0.82
DDX55-211ENST00000544429 CCL26Q9Y258 94 aa20.16■□□□□ 0.82
DDX55-211ENST00000544429 TRAV19A0A0A6YYK7 116 aa20.15■□□□□ 0.82
DDX55-211ENST00000544429 CFHP08603 1231 aa20.15■□□□□ 0.82
DDX55-211ENST00000544429 AVPR1AP37288 418 aa20.15■□□□□ 0.82
DDX55-211ENST00000544429 PDE6CP51160 858 aa20.15■□□□□ 0.82
DDX55-211ENST00000544429 ZNF445P59923 1031 aa20.15■□□□□ 0.82
DDX55-211ENST00000544429 GPC5P78333 572 aa20.15■□□□□ 0.82
DDX55-211ENST00000544429 SLC7A9P82251 487 aa20.15■□□□□ 0.82
DDX55-211ENST00000544429 ZXDBP98169 803 aa20.15■□□□□ 0.82
DDX55-211ENST00000544429 IFRD2Q12894 506 aaPredicted RBP20.15■□□□□ 0.82
DDX55-211ENST00000544429 PMF1Q6P1K2 205 aa20.15■□□□□ 0.82
DDX55-211ENST00000544429 SCD5Q86SK9 330 aa20.15■□□□□ 0.82
DDX55-211ENST00000544429 CELF5Q8N6W0 485 aaKnown RBP20.15■□□□□ 0.82
DDX55-211ENST00000544429 ARL14EPQ8N8R7 260 aaPredicted RBP20.15■□□□□ 0.82
DDX55-211ENST00000544429 SECISBP2LQ93073 1101 aaKnown RBP20.15■□□□□ 0.82
DDX55-211ENST00000544429 NAP1L5Q96NT1 182 aaPredicted RBP20.15■□□□□ 0.82
DDX55-211ENST00000544429 SMG9Q9H0W8 520 aaKnown RBP20.15■□□□□ 0.82
DDX55-211ENST00000544429 KIF9Q9HAQ2 790 aa20.15■□□□□ 0.82
DDX55-211ENST00000544429 TRPV5Q9NQA5 729 aa20.15■□□□□ 0.82
DDX55-211ENST00000544429 CYLDQ9NQC7 956 aa20.15■□□□□ 0.82
DDX55-211ENST00000544429 PCDHGC3Q9UN70 934 aa20.15■□□□□ 0.82
DDX55-211ENST00000544429 ARHGAP26Q9UNA1 814 aa20.15■□□□□ 0.82
DDX55-211ENST00000544429 TICRRQ7Z2Z1 1910 aa20.15■□□□□ 0.82
DDX55-211ENST00000544429 M0QYV0 167 aa20.14■□□□□ 0.81
DDX55-211ENST00000544429 MED7O43513 233 aa20.14■□□□□ 0.81
DDX55-211ENST00000544429 GPR37L1O60883 481 aa20.14■□□□□ 0.81
DDX55-211ENST00000544429 USP17L7P0C7H9 530 aa20.14■□□□□ 0.81
DDX55-211ENST00000544429 HDCP19113 662 aa20.14■□□□□ 0.81
DDX55-211ENST00000544429 PTK2Q05397 1052 aa20.14■□□□□ 0.81
DDX55-211ENST00000544429 RAPGEF1Q13905 1077 aa20.14■□□□□ 0.81
DDX55-211ENST00000544429 NR1I3Q14994 352 aa20.14■□□□□ 0.81
DDX55-211ENST00000544429 SLC47A2Q86VL8 602 aa20.14■□□□□ 0.81
DDX55-211ENST00000544429 STK32AQ8WU08 396 aa20.14■□□□□ 0.81
DDX55-211ENST00000544429 HSFY1Q96LI6 401 aa20.14■□□□□ 0.81
DDX55-211ENST00000544429 TRMT61BQ9BVS5 477 aaKnown RBP20.14■□□□□ 0.81
DDX55-211ENST00000544429 NMUR1Q9HB89 426 aa20.14■□□□□ 0.81
DDX55-211ENST00000544429 TRPC7Q9HCX4 862 aa20.14■□□□□ 0.81
DDX55-211ENST00000544429 TLR8Q9NR97 1041 aaKnown RBP20.14■□□□□ 0.81
DDX55-211ENST00000544429 WNT16Q9UBV4 365 aa20.14■□□□□ 0.81
DDX55-211ENST00000544429 A0A1W2PQC6 194 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 COCHO43405 550 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 THAP12O43422 761 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 USP8P40818 1118 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 TKTL1P51854 596 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 POLR2FP61218 127 aaKnown RBP20.13■□□□□ 0.81
DDX55-211ENST00000544429 USP4Q13107 963 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 GRM2Q14416 872 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 ZNF77Q15935 545 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 HECTD3Q5T447 861 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 DENND1BQ6P3S1 775 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 BMP8AQ7Z5Y6 402 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 GPIHBP1Q8IV16 184 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 KIAA1958Q8N8K9 716 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 BPIFB1Q8TDL5 484 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 DDX1Q92499 740 aaKnown RBP20.13■□□□□ 0.81
DDX55-211ENST00000544429 ZFRQ96KR1 1074 aaKnown RBP20.13■□□□□ 0.81
DDX55-211ENST00000544429 LHX5Q9H2C1 402 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 TSPY26PQ9H489 355 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 CLIC5Q9NZA1 410 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 CYTH4Q9UIA0 394 aa20.13■□□□□ 0.81
DDX55-211ENST00000544429 CHADO15335 359 aa20.12■□□□□ 0.81
DDX55-211ENST00000544429 ZBED1O96006 694 aa20.12■□□□□ 0.81
DDX55-211ENST00000544429 CKMP06732 381 aa20.12■□□□□ 0.81
DDX55-211ENST00000544429 PBX1P40424 430 aa20.12■□□□□ 0.81
DDX55-211ENST00000544429 PSEN1P49768 467 aa20.12■□□□□ 0.81
DDX55-211ENST00000544429 BPIFB4P59827 614 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms