RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 NAT9Q9BTE0 207 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 SLCO1B3Q9NPD5 702 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 TBC1D12O60347 775 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 C16orf72Q14CZ0 275 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 ABRAQ8N0Z2 381 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 LNX1Q8TBB1 728 aaPredicted RBP20.03■□□□□ 0.8
SUDS3-204ENST00000543473 ART4Q93070 314 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 LRFN2Q9ULH4 789 aa20.03■□□□□ 0.8
SUDS3-204ENST00000543473 PSMD3O43242 534 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 TGM2P21980 687 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 CLK1P49759 484 aaKnown RBP20.02■□□□□ 0.8
SUDS3-204ENST00000543473 PDK4Q16654 411 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 MICU2Q8IYU8 434 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 PDCD6IPQ8WUM4 868 aaKnown RBP20.02■□□□□ 0.8
SUDS3-204ENST00000543473 PYDC1Q8WXC3 89 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 IFT172Q9UG01 1749 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 EEF2KO00418 725 aaKnown RBP20.02■□□□□ 0.8
SUDS3-204ENST00000543473 C1QBPQ07021 282 aaKnown RBP20.02■□□□□ 0.8
SUDS3-204ENST00000543473 TKFCQ3LXA3 575 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 TFB1MQ8WVM0 346 aaKnown RBP20.02■□□□□ 0.8
SUDS3-204ENST00000543473 VPS50Q96JG6 964 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 TMEM79Q9BSE2 394 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 ZNF518BQ9C0D4 1074 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 VIRMAQ69YN4 1812 aaKnown RBP20.02■□□□□ 0.8
SUDS3-204ENST00000543473 CCDC159P0C7I6 412 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 CDH2P19022 906 aaPredicted RBP20.02■□□□□ 0.8
SUDS3-204ENST00000543473 RGS2P41220 211 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 FAAP100Q0VG06 881 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 SEZ6Q53EL9 994 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 PLEKHA7Q6IQ23 1121 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 ANKRD13AQ8IZ07 590 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 SNX19Q92543 992 aa20.02■□□□□ 0.8
SUDS3-204ENST00000543473 KBTBD13C9JR72 458 aa20.02■□□□□ 0.79
SUDS3-204ENST00000543473 F8W8V4 182 aa20.02■□□□□ 0.79
SUDS3-204ENST00000543473 GARTP22102 1010 aa20.02■□□□□ 0.79
SUDS3-204ENST00000543473 MARCKSL1P49006 195 aa20.02■□□□□ 0.79
SUDS3-204ENST00000543473 ADARP55265 1226 aaKnown RBP20.02■□□□□ 0.79
SUDS3-204ENST00000543473 IRF2BP2Q7Z5L9 587 aa20.02■□□□□ 0.79
SUDS3-204ENST00000543473 SP110Q9HB58 689 aa20.02■□□□□ 0.79
SUDS3-204ENST00000543473 ARPP19P56211 112 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 CYP24A1Q07973 514 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 TMEM132DQ14C87 1099 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 TWF2Q6IBS0 349 aaKnown RBP20.01■□□□□ 0.79
SUDS3-204ENST00000543473 DENND5BQ6ZUT9 1274 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 TMCO5AQ8N6Q1 288 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 PARD3BQ8TEW8 1205 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 LRMDAQ9H2I8 198 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 KCNQ5Q9NR82 932 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 SMIM22K7EJ46 135 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 CASP5P51878 434 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 KYAT1Q16773 422 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 PARP6Q2NL67 630 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 USP13Q92995 863 aaPredicted RBP20.01■□□□□ 0.79
SUDS3-204ENST00000543473 GCNAQ96QF7 691 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 MED15Q96RN5 788 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 PROCP04070 461 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 TAF1CQ15572 869 aaPredicted RBP20.01■□□□□ 0.79
SUDS3-204ENST00000543473 KCNV1Q6PIU1 500 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 EMC1Q8N766 993 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 DNAJC19Q96DA6 116 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 AVENQ9NQS1 362 aaPredicted RBP20.01■□□□□ 0.79
SUDS3-204ENST00000543473 KCNK4Q9NYG8 393 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 RPL26L1Q9UNX3 145 aaKnown RBP20.01■□□□□ 0.79
SUDS3-204ENST00000543473 TLR2O60603 784 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 USP1O94782 785 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 RFWD2Q8NHY2 731 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 TCF7L2Q9NQB0 619 aa20.01■□□□□ 0.79
SUDS3-204ENST00000543473 TNPO2O14787 897 aaKnown RBP20■□□□□ 0.79
SUDS3-204ENST00000543473 SLC1A6P48664 564 aa20■□□□□ 0.79
SUDS3-204ENST00000543473 SLC12A3P55017 1021 aa20■□□□□ 0.79
SUDS3-204ENST00000543473 KCNK10P57789 538 aa20■□□□□ 0.79
SUDS3-204ENST00000543473 LBRQ14739 615 aaKnown RBP20■□□□□ 0.79
SUDS3-204ENST00000543473 DENND1BQ6P3S1 775 aa20■□□□□ 0.79
SUDS3-204ENST00000543473 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20■□□□□ 0.79
SUDS3-204ENST00000543473 ZNF398Q8TD17 642 aa20■□□□□ 0.79
SUDS3-204ENST00000543473 ZNF560Q96MR9 790 aa20■□□□□ 0.79
SUDS3-204ENST00000543473 PURBQ96QR8 312 aaKnown RBP20■□□□□ 0.79
SUDS3-204ENST00000543473 PAIP1Q9H074 479 aaKnown RBP20■□□□□ 0.79
SUDS3-204ENST00000543473 NRDE2Q9H7Z3 1164 aa20■□□□□ 0.79
SUDS3-204ENST00000543473 DDX4Q9NQI0 724 aaKnown RBP20■□□□□ 0.79
SUDS3-204ENST00000543473 LIN7AO14910 233 aaPredicted RBP20■□□□□ 0.79
SUDS3-204ENST00000543473 SERPINE1P05121 402 aa20■□□□□ 0.79
SUDS3-204ENST00000543473 ZSCAN5DPP0CG00 497 aa20■□□□□ 0.79
SUDS3-204ENST00000543473 ITGA9Q13797 1035 aa20■□□□□ 0.79
SUDS3-204ENST00000543473 SCN4BQ8IWT1 228 aa20■□□□□ 0.79
SUDS3-204ENST00000543473 ASAP3Q8TDY4 903 aa20■□□□□ 0.79
SUDS3-204ENST00000543473 LRRC19Q9H756 370 aa20■□□□□ 0.79
SUDS3-204ENST00000543473 H2AFYO75367 372 aaKnown RBP20■□□□□ 0.79
SUDS3-204ENST00000543473 N4BP2L1Q5TBK1 243 aaPredicted RBP20■□□□□ 0.79
SUDS3-204ENST00000543473 USP18Q9UMW8 372 aa20■□□□□ 0.79
SUDS3-204ENST00000543473 DCDC2CA8MYV0 355 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 SHMT1P34896 483 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 DEFA1P59665 94 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 DEFA3P59666 94 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 DCTN2Q13561 401 aaKnown RBP19.99■□□□□ 0.79
SUDS3-204ENST00000543473 EPS8L1Q8TE68 723 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 TAAR1Q96RJ0 339 aa19.99■□□□□ 0.79
SUDS3-204ENST00000543473 DDX50Q9BQ39 737 aaKnown RBP19.99■□□□□ 0.79
SUDS3-204ENST00000543473 OLA1Q9NTK5 396 aaKnown RBP19.99■□□□□ 0.79
SUDS3-204ENST00000543473 FAM53CQ9NYF3 392 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms