RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 MYH11P35749 1972 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 A0A0B4J269 797 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 ARL5CA6NH57 179 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 A6NNZ2 444 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 MEIS3P2A8K0S8 358 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 TISP43B9A030 160 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 ABLIM1O14639 778 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 ENC1O14682 589 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 KIAA0391O15091 583 aaKnown RBP5.49□□□□□ -1.53
CLIP1-217ENST00000543205 OGTO15294 1046 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 CBFA2T2O43439 604 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 CALUO43852 315 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-217ENST00000543205 DEAF1O75398 565 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-217ENST00000543205 OFD1O75665 1012 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 CA3P07451 260 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 CLTAP09496 248 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 FAM200BP0CF97 657 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 GLULP15104 373 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 MLH1P40692 756 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 SNRPFP62306 86 aaKnown RBP5.49□□□□□ -1.53
CLIP1-217ENST00000543205 RNASELQ05823 741 aaKnown RBP5.49□□□□□ -1.53
CLIP1-217ENST00000543205 HSP90AA2PQ14568 343 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-217ENST00000543205 NOMO2Q5JPE7 1267 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 CLLU1OSQ5K130 101 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 GPR158Q5T848 1215 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 SLC39A4Q6P5W5 647 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 ALYREFQ86V81 257 aaKnown RBP5.49□□□□□ -1.53
CLIP1-217ENST00000543205 FAM186BQ8IYM0 893 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 SMYD4Q8IYR2 804 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-217ENST00000543205 LRRC43Q8N309 656 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 PPM1KQ8N3J5 372 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 CHCHD4Q8N4Q1 142 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 GALNT11Q8NCW6 608 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 GOLGA5Q8TBA6 731 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 IPO4Q8TEX9 1081 aaKnown RBP5.49□□□□□ -1.53
CLIP1-217ENST00000543205 SYAP1Q96A49 352 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-217ENST00000543205 ZNF689Q96CS4 500 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-217ENST00000543205 KLHDC7BQ96G42 594 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 CASD1Q96PB1 797 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 FAM193BQ96PV7 902 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-217ENST00000543205 GAD1Q99259 594 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 IKZF4Q9H2S9 585 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 PCIF1Q9H4Z3 704 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 SOX17Q9H6I2 414 aaPredicted RBP5.49□□□□□ -1.53
CLIP1-217ENST00000543205 RPF1Q9H9Y2 349 aaKnown RBP5.49□□□□□ -1.53
CLIP1-217ENST00000543205 SLC28A3Q9HAS3 691 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 MAN1C1Q9NR34 630 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 PCDHB10Q9UN67 800 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 YBX2Q9Y2T7 364 aaKnown RBP5.49□□□□□ -1.53
CLIP1-217ENST00000543205 STYXL1Q9Y6J8 313 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 VCANP13611 3396 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 MICAL3Q7RTP6 2002 aa5.49□□□□□ -1.53
CLIP1-217ENST00000543205 LCHNA4D1U4 455 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 J3KRW8 73 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 PDXKO00764 312 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 CLIC2O15247 247 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 TGFB1I1O43294 461 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 EXTL3O43909 919 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 RECQL4O94761 1208 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 PRKD3O94806 890 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 MT-CO1P00395 513 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 POMCP01189 267 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 ADSSP30520 456 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 HOXD13P35453 343 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 PPP1R2P41236 205 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 PRCPP42785 496 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 MAPK9P45984 424 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 ACOT2P49753 483 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 ZNF165P49910 485 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 NLRP12P59046 1061 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 ADCY1Q08828 1119 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 DHCR24Q15392 516 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 TAF11Q15544 211 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 WDR45BQ5MNZ6 344 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 CCDC183Q5T5S1 534 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 REC114Q7Z4M0 266 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 GUF1Q8N442 669 aaKnown RBP5.48□□□□□ -1.53
CLIP1-217ENST00000543205 TRIML1Q8N9V2 468 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 GATAD2BQ8WXI9 593 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 SAAL1Q96ER3 474 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 NECAB3Q96P71 396 aaPredicted RBP5.48□□□□□ -1.53
CLIP1-217ENST00000543205 TSG101Q99816 390 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 CBWD1Q9BRT8 395 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 FAM213AQ9BRX8 229 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 HAPLN2Q9GZV7 340 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 ARHGEF4Q9NR80 690 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 AGPAT3Q9NRZ7 376 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 HSPBP1Q9NZL4 362 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 RWDD3Q9Y3V2 267 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 ZMYM2Q9UBW7 1377 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 LINC01553A4QN01 128 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 GOLGA8IPA6NC78 632 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 GOLGA8JA6NMD2 632 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 PSMA7O14818 248 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 BRINP1O60477 761 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 EXOC3O60645 756 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 THP07101 528 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 CXCL8P10145 99 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 MYBL2P10244 700 aa5.48□□□□□ -1.53
CLIP1-217ENST00000543205 LAG3P18627 525 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms