RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 GABBR2O75899 941 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 ARID5AQ03989 594 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 ADIGQ0VDE8 80 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 FAM78AQ5JUQ0 283 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 TAF3Q5VWG9 929 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 SNX30Q5VWJ9 437 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 SPECC1LQ69YQ0 1117 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 TXNDC8Q6A555 127 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 PM20D1Q6GTS8 502 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 GPIHBP1Q8IV16 184 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 PASD1Q8IV76 773 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 VSTM4Q8IW00 320 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 SCML4Q8N228 414 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 WDTC1Q8N5D0 677 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 MAB21L3Q8N8X9 362 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 ZSCAN18Q8TBC5 510 aaPredicted RBP18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 ASB16Q96NS5 453 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 SLC4A5Q9BY07 1137 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 PDCL3Q9H2J4 239 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 CYLDQ9NQC7 956 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 LIMD1Q9UGP4 676 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 CAPN11Q9UMQ6 739 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 CEP83Q9Y592 693 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 DENND4CQ5VZ89 1909 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 OBSL1O75147 1896 aa18.01■□□□□ 0.47
RABGGTA-203ENST00000543002 ANHXE9PGG2 379 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 ZBED1O96006 694 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 GYPCP04921 128 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 MMEP08473 750 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 USP17L7P0C7H9 530 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 PFKLP17858 780 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 WEE1P30291 646 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 CDH5P33151 784 aaPredicted RBP18■□□□□ 0.47
RABGGTA-203ENST00000543002 ACADSBP45954 432 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 CDR2Q01850 454 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 MTSS1LQ765P7 747 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 IRF2BP2Q7Z5L9 587 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 CMTM8Q8IZV2 173 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 SIX6OS1Q8N1H7 587 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 ZNF397Q8NF99 534 aaPredicted RBP18■□□□□ 0.47
RABGGTA-203ENST00000543002 SLC20A1Q8WUM9 679 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 SMARCD2Q92925 531 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 NXPE3Q969Y0 559 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 ULBP1Q9BZM6 244 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 NUCKS1Q9H1E3 243 aaKnown RBP18■□□□□ 0.47
RABGGTA-203ENST00000543002 TRPV4Q9HBA0 871 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 TRPC7Q9HCX4 862 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 CD320Q9NPF0 282 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 CNGB3Q9NQW8 809 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 TLR8Q9NR97 1041 aaKnown RBP18■□□□□ 0.47
RABGGTA-203ENST00000543002 AIPL1Q9NZN9 384 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 IGSF9Q9P2J2 1179 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 CYTH4Q9UIA0 394 aa18■□□□□ 0.47
RABGGTA-203ENST00000543002 C2orf78A6NCI8 922 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 ABL1P00519 1130 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 LCP1P13796 627 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 CHRNB2P17787 502 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 PGFP49763 221 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 PSEN1P49768 467 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 ZBED6P86452 979 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 PDCLQ13371 301 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 HTR4Q13639 388 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 TRIM14Q14142 442 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 ASIC2Q16515 512 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 SFMBT2Q5VUG0 894 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 PARM1Q6UWI2 310 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 SCD5Q86SK9 330 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 TMEM110Q86TL2 294 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 ARID3BQ8IVW6 561 aaPredicted RBP17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 TMEM35BQ8NCS4 154 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 C1orf131Q8NDD1 294 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 CPLX3Q8WVH0 158 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 NOX5Q96PH1 765 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 NMUR1Q9HB89 426 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 ST7Q9NRC1 585 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 LUC7L2Q9Y383 392 aaKnown RBP17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 ANAPC1Q9H1A4 1944 aa17.99■□□□□ 0.47
RABGGTA-203ENST00000543002 TRAV19A0A0A6YYK7 116 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 A0A1W2PQH9 124 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 LSM8O95777 96 aaKnown RBP17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 OAS1P00973 400 aaKnown RBP17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 HDCP19113 662 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 FCARP24071 287 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 AVPR1AP37288 418 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 TUBP50607 506 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 FMO1Q01740 532 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 E4F1Q66K89 784 aaPredicted RBP17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 TRIM72Q6ZMU5 477 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 BHLHA9Q7RTU4 235 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 RNF135Q8IUD6 432 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 ARHGAP18Q8N392 663 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 SYN2Q92777 582 aaPredicted RBP17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 FGF14Q92915 247 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 SLC22A12Q96S37 553 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 KCNK12Q9HB15 430 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 ZFP14Q9HCL3 533 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 NUMBLQ9Y6R0 609 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 PIK3R2O00459 728 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 ECI2O75521 394 aa17.98■□□□□ 0.47
RABGGTA-203ENST00000543002 FBXO21O94952 628 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms