RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 C15orf59Q2T9L4 293 aaPredicted RBP13.91□□□□□ -0.18
CHFR-221ENST00000542714 EFHC1Q5JVL4 640 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 OTUD1Q5VV17 481 aaPredicted RBP13.91□□□□□ -0.18
CHFR-221ENST00000542714 SLC8B1Q6J4K2 584 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 RHOT1Q8IXI2 618 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 SCML4Q8N228 414 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 ATAD1Q8NBU5 361 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 MNS1Q8NEH6 495 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 FBXO22Q8NEZ5 403 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 PHOSPHO2Q8TCD6 241 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 CLP1Q92989 425 aaKnown RBP13.91□□□□□ -0.18
CHFR-221ENST00000542714 C8orf48Q96LL4 319 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 SLC2A13Q96QE2 648 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 LBHD1Q9BQE6 289 aaPredicted RBP13.91□□□□□ -0.18
CHFR-221ENST00000542714 CLSTN3Q9BQT9 956 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 DDX23Q9BUQ8 820 aaKnown RBP13.91□□□□□ -0.18
CHFR-221ENST00000542714 CNGB3Q9NQW8 809 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 INSL6Q9Y581 213 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 CDY1Q9Y6F8 540 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 USP3Q9Y6I4 520 aa13.91□□□□□ -0.18
CHFR-221ENST00000542714 MKI67P46013 3256 aaKnown RBP13.9□□□□□ -0.18
CHFR-221ENST00000542714 WDR27A2RRH5 827 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 CARNS1A5YM72 827 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 CTIFO43310 598 aaKnown RBP13.9□□□□□ -0.18
CHFR-221ENST00000542714 HSF2BPO75031 334 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 ZBED1O96006 694 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 FYNP06241 537 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 USP17L7P0C7H9 530 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 PYGMP11217 842 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 ATP2A2P16615 1042 aaKnown RBP13.9□□□□□ -0.18
CHFR-221ENST00000542714 IL1R2P27930 398 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 PPM1AP35813 382 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 GJC1P36383 396 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 GRIK1P39086 918 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 PTPN9P43378 593 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 RWDD2BP57060 319 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 ROR1Q01973 937 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 NAA30Q147X3 362 aaPredicted RBP13.9□□□□□ -0.18
CHFR-221ENST00000542714 ACAP1Q15027 740 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 ATP13A4Q4VNC1 1196 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 LRRC38Q5VT99 294 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 SDHAF4Q5VUM1 108 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 PM20D1Q6GTS8 502 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 VSTM1Q6UX27 236 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 CYP4V2Q6ZWL3 525 aaPredicted RBP13.9□□□□□ -0.18
CHFR-221ENST00000542714 RSRC2Q7L4I2 434 aaKnown RBP13.9□□□□□ -0.18
CHFR-221ENST00000542714 KATNAL2Q8IYT4 538 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 STKLD1Q8NE28 680 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 ACTRT1Q8TDG2 376 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 DPF3Q92784 378 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 RNPC3Q96LT9 517 aaKnown RBP13.9□□□□□ -0.18
CHFR-221ENST00000542714 CFAP57Q96MR6 1250 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 PEBP4Q96S96 227 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 RAD9AQ99638 391 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 ZBED2Q9BTP6 218 aa13.9□□□□□ -0.18
CHFR-221ENST00000542714 TTC7AQ9ULT0 858 aaPredicted RBP13.9□□□□□ -0.18
CHFR-221ENST00000542714 UQCRHLA0A096LP55 91 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 CTAGE15A4D2H0 777 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 YJEFN3A6XGL0 299 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 E7ENQ6 273 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 C2CD2LO14523 706 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 TLL1O43897 1013 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 LILRB3O75022 631 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 SOAT2O75908 522 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 FGF18O76093 207 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 UQCRHP07919 91 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 GLI1P08151 1106 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 CTAGE8P0CG41 777 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 HAPLN1P10915 354 aaPredicted RBP13.89□□□□□ -0.19
CHFR-221ENST00000542714 MIPP30301 263 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 OR1D2P34982 312 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 SSR1P43307 286 aaKnown RBP13.89□□□□□ -0.19
CHFR-221ENST00000542714 SLC5A3P53794 718 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 PITX1P78337 314 aaPredicted RBP13.89□□□□□ -0.19
CHFR-221ENST00000542714 C2orf54Q08AI8 447 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 C9orf50Q5SZB4 431 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 CCDC181Q5TID7 509 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 ANKS1BQ7Z6G8 1248 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 CTAGE6Q86UF2 777 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 SCN4BQ8IWT1 228 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 CTAGE4Q8IX94 777 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 DEFB106AQ8N104 65 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 VPS52Q8N1B4 723 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 NOA1Q8NC60 698 aaKnown RBP13.89□□□□□ -0.19
CHFR-221ENST00000542714 SCAMP5Q8TAC9 235 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 SPPL2BQ8TCT7 592 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 C2orf15Q8WU43 125 aaKnown RBP13.89□□□□□ -0.19
CHFR-221ENST00000542714 AUTS2Q8WXX7 1259 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 IRGQQ8WZA9 623 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 CENPIQ92674 756 aaPredicted RBP13.89□□□□□ -0.19
CHFR-221ENST00000542714 TBCBQ99426 244 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 HERPUD2Q9BSE4 406 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 ZBP1Q9H171 429 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 AAASQ9NRG9 546 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 KLHL11Q9NVR0 708 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.89□□□□□ -0.19
CHFR-221ENST00000542714 CALCOCO1Q9P1Z2 691 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 RNF14Q9UBS8 474 aa13.89□□□□□ -0.19
CHFR-221ENST00000542714 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.89□□□□□ -0.19
CHFR-221ENST00000542714 SLC27A5Q9Y2P5 690 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms