RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 METTL13Q8N6R0 699 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 TRPC4APQ8TEL6 797 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 SCFD2Q8WU76 684 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 EMID1Q96A84 441 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 HNRNPABQ99729 332 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 FAM213AQ9BRX8 229 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 HMX1Q9NP08 348 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 KLHL14Q9P2G3 628 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 TMEM59LQ9UK28 342 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 ARL2BPQ9Y2Y0 163 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 SNX24Q9Y343 169 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 PTPRJQ12913 1337 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 A0A0B4J269 797 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 LRRIQ4A6NIV6 560 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 MUSKO15146 869 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 B4GALT4O60513 344 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 ENTPD5O75356 428 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 CELF2O95319 508 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 SNAI1O95863 264 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 TPBGLP0DKB5 382 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 TARSP26639 723 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 GSTT1P30711 240 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 CD97P48960 835 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 MTTPP55157 894 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 BPIFB3P59826 476 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 TTLL4Q14679 1199 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 PSMD6Q15008 389 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 ACAP1Q15027 740 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 ZBTB41Q5SVQ8 909 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 FOXB2Q5VYV0 432 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 ZNF554Q86TJ5 538 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 LRRC57Q8N9N7 239 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 TAS1R2Q8TE23 839 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 PRPF31Q8WWY3 499 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 CCDC127Q96BQ5 260 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 ZBTB45Q96K62 511 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 FAM84AQ96KN4 292 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 RXFP1Q9HBX9 757 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 POLMQ9NP87 494 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 UBE2TQ9NPD8 197 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 FANCFQ9NPI8 374 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 FAM114A2Q9NRY5 505 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 HAO1Q9UJM8 370 aa8.34□□□□□ -1.07
PDLIM5-221ENST00000542407 FOXO6A8MYZ6 492 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 MSCO60682 206 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 PEX11AO75192 247 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 FGFR4P22455 802 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 S100A1P23297 94 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 VARSP26640 1264 aaKnown RBP8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 ATP5DP30049 168 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 CHKAP35790 457 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 LIG4P49917 911 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 SLC26A2P50443 739 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 CACNA2D1P54289 1103 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 GEMIN4P57678 1058 aaKnown RBP8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 SNX16P57768 344 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 GBE1Q04446 702 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 CNGA2Q16280 664 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 ARHGAP44Q17R89 818 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 SGSM1Q2NKQ1 1148 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 SV2AQ7L0J3 742 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 ASRGL1Q7L266 308 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 PEX26Q7Z412 305 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 GPR142Q7Z601 462 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 CCDC25Q86WR0 208 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 GLYCTKQ8IVS8 523 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 FAM71AQ8IYT1 594 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 LINC01465Q8N7H1 131 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 CCDC89Q8N998 374 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 EIF1ADQ8N9N8 165 aaKnown RBP8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 SCG3Q8WXD2 468 aaKnown RBP8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 GLG1Q92896 1179 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 UTP4Q969X6 686 aaKnown RBP8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 ANKRD27Q96NW4 1050 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 DDX50Q9BQ39 737 aaKnown RBP8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 B3GNT4Q9C0J1 378 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 VTA1Q9NP79 307 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 METTL5Q9NRN9 209 aaKnown RBP8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 INTUQ9ULD6 942 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 LZTS1Q9Y250 596 aa8.34□□□□□ -1.08
PDLIM5-221ENST00000542407 NCANO14594 1321 aa8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 CNTNAP2Q9UHC6 1331 aa8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 A0A0A6YYK5 440 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 NOP56O00567 594 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 KIAA0391O15091 583 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 NVLO15381 856 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 STRNO43815 780 aa8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 GAS2O43903 313 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 GM2AP17900 193 aa8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 LAMTOR4Q0VGL1 99 aa8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 STRN3Q13033 797 aa8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 TUBA3CQ13748 450 aa8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 IER5Q5VY09 327 aa8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 OR52E8Q6IFG1 317 aa8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 FBXL13Q8NEE6 735 aa8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 SLC20A1Q8WUM9 679 aa8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 TRAPPC12Q8WVT3 735 aa8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 SHC3Q92529 594 aa8.33□□□□□ -1.08
PDLIM5-221ENST00000542407 TARS2Q9BW92 718 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms