RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 ANKLE1Q8NAG6 615 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 HNRNPLLQ8WVV9 542 aaKnown RBP11.55□□□□□ -0.56
SCG3-202ENST00000542355 KCTD13Q8WZ19 329 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 RBM41Q96IZ5 413 aaKnown RBP11.55□□□□□ -0.56
SCG3-202ENST00000542355 OSBPL8Q9BZF1 889 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 RAB6CQ9H0N0 254 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 TMEM30AQ9NV96 361 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 DDX56Q9NY93 547 aaKnown RBP11.55□□□□□ -0.56
SCG3-202ENST00000542355 USP18Q9UMW8 372 aa11.55□□□□□ -0.56
SCG3-202ENST00000542355 HOXA2O43364 376 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 KRT7P08729 469 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 MYBL2P10244 700 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 KRT10P13645 584 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 BDNFP23560 247 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 SDC4P31431 198 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 IKBKEQ14164 716 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 TRADDQ15628 312 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 BEND6Q5SZJ8 279 aaPredicted RBP11.54□□□□□ -0.56
SCG3-202ENST00000542355 POLNQ7Z5Q5 900 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 CEP57Q86XR8 500 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 IFT20Q8IY31 132 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 SIX6OS1Q8N1H7 587 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 ZMIZ2Q8NF64 920 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 C1orf54Q8WWF1 131 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 IFT81Q8WYA0 676 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 SMARCD1Q96GM5 515 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 SLITRK1Q96PX8 696 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 NGRNQ9NPE2 291 aaKnown RBP11.54□□□□□ -0.56
SCG3-202ENST00000542355 PRDM5Q9NQX1 630 aaPredicted RBP11.54□□□□□ -0.56
SCG3-202ENST00000542355 PCDH10Q9P2E7 1040 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 FAN1Q9Y2M0 1017 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 LRRD1A4D1F6 860 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 NT5C1B-RDH14C9J2C7 533 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 TPD52L2O43399 206 aaKnown RBP11.54□□□□□ -0.56
SCG3-202ENST00000542355 PHF2O75151 1096 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 TRUB2O95900 331 aaKnown RBP11.54□□□□□ -0.56
SCG3-202ENST00000542355 CHRNA3P32297 505 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 PCK1P35558 622 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 PBX3P40426 434 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 KCNJ1P48048 391 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 TKTL1P51854 596 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 MRPS5P82675 430 aaKnown RBP11.54□□□□□ -0.56
SCG3-202ENST00000542355 TSPY1Q01534 308 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 DR1Q01658 176 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 ADCY1Q08828 1119 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 EFHC1Q5JVL4 640 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 SCYL2Q6P3W7 929 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 TTC27Q6P3X3 843 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 CCDC137Q6PK04 289 aaKnown RBP11.54□□□□□ -0.56
SCG3-202ENST00000542355 FAM172AQ8WUF8 416 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 HSPH1Q92598 858 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 FAM149B1Q96BN6 582 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 PKMYT1Q99640 499 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 COLEC11Q9BWP8 271 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 GDF3Q9NR23 364 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 ADAM28Q9UKQ2 775 aa11.54□□□□□ -0.56
SCG3-202ENST00000542355 RECKO95980 971 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 GALTP07902 379 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 OR4Q2P0C623 313 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 TFE3P19532 575 aaPredicted RBP11.53□□□□□ -0.56
SCG3-202ENST00000542355 ITGB8P26012 769 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 SLC11A1P49279 550 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 CARSP49589 748 aaKnown RBP11.53□□□□□ -0.56
SCG3-202ENST00000542355 ADCY2Q08462 1091 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 KLF1Q13351 362 aaPredicted RBP11.53□□□□□ -0.56
SCG3-202ENST00000542355 SNX1Q13596 522 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 MAPRE1Q15691 268 aaKnown RBP11.53□□□□□ -0.56
SCG3-202ENST00000542355 CYP1B1Q16678 543 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 TMEM259Q4ZIN3 620 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 FAM171A1Q5VUB5 890 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 CNKSR3Q6P9H4 555 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 SPOCD1Q6ZMY3 1216 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 CCDC105Q8IYK2 499 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 MAIP1Q8WWC4 291 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 RUBCNQ92622 972 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 VWCEQ96DN2 955 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 GDAP1L1Q96MZ0 367 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 PEBP4Q96S96 227 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 PHOX2BQ99453 314 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 TMEM106CQ9BVX2 250 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 MRPL9Q9BYD2 267 aaKnown RBP11.53□□□□□ -0.56
SCG3-202ENST00000542355 GPR62Q9BZJ7 368 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 CHST7Q9NS84 486 aa11.53□□□□□ -0.56
SCG3-202ENST00000542355 PRPSAP2O60256 369 aa11.52□□□□□ -0.56
SCG3-202ENST00000542355 OAZ2O95190 189 aa11.52□□□□□ -0.56
SCG3-202ENST00000542355 HSPA1AP0DMV8 641 aaKnown RBP11.52□□□□□ -0.56
SCG3-202ENST00000542355 HSPA1BP0DMV9 641 aaKnown RBP11.52□□□□□ -0.56
SCG3-202ENST00000542355 DESP17661 470 aa11.52□□□□□ -0.56
SCG3-202ENST00000542355 SCNN1AP37088 669 aa11.52□□□□□ -0.56
SCG3-202ENST00000542355 COILP38432 576 aaPredicted RBP11.52□□□□□ -0.56
SCG3-202ENST00000542355 CTCFP49711 727 aaPredicted RBP11.52□□□□□ -0.56
SCG3-202ENST00000542355 MAP9Q49MG5 647 aa11.52□□□□□ -0.56
SCG3-202ENST00000542355 GPRIN1Q7Z2K8 1008 aa11.52□□□□□ -0.56
SCG3-202ENST00000542355 NECAB2Q7Z6G3 386 aa11.52□□□□□ -0.56
SCG3-202ENST00000542355 MTERF4Q7Z6M4 381 aaKnown RBP11.52□□□□□ -0.56
SCG3-202ENST00000542355 SPATA2LQ8IUW3 424 aaPredicted RBP11.52□□□□□ -0.56
SCG3-202ENST00000542355 KCTD6Q8NC69 237 aa11.52□□□□□ -0.56
SCG3-202ENST00000542355 CASKIN2Q8WXE0 1202 aa11.52□□□□□ -0.56
SCG3-202ENST00000542355 ATG4AQ8WYN0 398 aa11.52□□□□□ -0.56
SCG3-202ENST00000542355 B3GALT6Q96L58 329 aa11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms