RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 DSG1Q02413 1049 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 CREB5Q02930 508 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 KRT17Q04695 432 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 ASPHQ12797 758 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 STX3Q13277 289 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 ACAP2Q15057 778 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 STK38Q15208 465 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 TGFBIQ15582 683 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 EZH2Q15910 746 aaKnown RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 LETM2Q2VYF4 491 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 C5orf22Q49AR2 442 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 ZC2HC1CQ53FD0 456 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 ALFQ53S48 1182 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 CAVIN4Q5BKX8 364 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 AARS2Q5JTZ9 985 aaKnown RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 HYIQ5T013 277 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 C6orf183Q5T699 404 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 ATAD3BQ5T9A4 648 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 LCE2AQ5TA79 106 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 SLC6A19Q695T7 634 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 CEP85Q6P2H3 762 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 LRRC74BQ6ZQY2 392 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 PRR23BQ6ZRT6 265 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 RFPL4BQ6ZWI9 263 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 HAUS6Q7Z4H7 955 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 ADCK1Q86TW2 530 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 ZC3H18Q86VM9 953 aaKnown RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 CLVS1Q8IUQ0 354 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 CCDC28AQ8IWP9 274 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 MRPL41Q8IXM3 137 aaKnown RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 SLFN12Q8IYM2 578 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 CHPFQ8IZ52 775 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 RIBC1Q8N443 379 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 CELF2-AS1Q8N7Q2 184 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 C12orf50Q8NA57 414 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 EXD1Q8NHP7 514 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 KCNG4Q8TDN1 519 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 GIPC3Q8TF64 312 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 NELFBQ8WX92 580 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 RSAD2Q8WXG1 361 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 HERVK_113Q902F9 699 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 TTC17Q96AE7 1141 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 CCDC127Q96BQ5 260 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 ACSF2Q96CM8 615 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 PGM2Q96G03 612 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 SPATA17Q96L03 361 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 CEP170P1Q96L14 293 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 C7orf26Q96N11 449 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 BTBD9Q96Q07 612 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 NACC1Q96RE7 527 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 MED15Q96RN5 788 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 MNTQ99583 582 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 UBAC1Q9BSL1 405 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 TTPALQ9BTX7 342 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 ISCA1Q9BUE6 129 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 MRPS26Q9BYN8 205 aaKnown RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 OSBPL6Q9BZF3 934 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 C6orf62Q9GZU0 229 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 TMEM168Q9H0V1 697 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 TNKS2Q9H2K2 1166 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 KCNN2Q9H2S1 579 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 EHD1Q9H4M9 534 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 GSX1Q9H4S2 264 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 Q9H521 79 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 THAP9Q9H5L6 903 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 SH2D4AQ9H788 454 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 PHAXQ9H814 394 aaKnown RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 MRPL44Q9H9J2 332 aaKnown RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 UCK1Q9HA47 277 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 KMT5AQ9NQR1 393 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 SAR1AQ9NR31 198 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 SNTG2Q9NY99 539 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 KLHL14Q9P2G3 628 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 SUCOQ9UBS9 1254 aaKnown RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 UBA2Q9UBT2 640 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 ATP6V1HQ9UI12 483 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 LNPEPQ9UIQ6 1025 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 AGO2Q9UKV8 859 aaKnown RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 NOB1Q9ULX3 412 aaKnown RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 PCDHA12Q9UN75 941 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 TBX22Q9Y458 520 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 SPEF1Q9Y4P9 236 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 STON1Q9Y6Q2 735 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 SLC4A4Q9Y6R1 1079 aa4.53□□□□□ -1.68
SNHG1-219ENST00000542112 XIRP1Q702N8 1843 aaKnown RBP4.53□□□□□ -1.68
SNHG1-219ENST00000542112 STRCP1A6NGW2 1772 aa4.53□□□□□ -1.69
SNHG1-219ENST00000542112 ITSN1Q15811 1721 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 MARF1Q9Y4F3 1742 aaKnown RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 ZNF804BA4D1E1 1349 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 WDR19Q8NEZ3 1342 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 SHPRHQ149N8 1683 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 SYNJ2BP-COX16A0A087WUM0 186 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 ARHGEF35A5YM69 484 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 F8W735 103 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 RNF103O00237 685 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 CES2O00748 559 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 KPNA5O15131 536 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 POLR1CO15160 346 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-219ENST00000542112 ACOX3O15254 700 aa4.52□□□□□ -1.69
SNHG1-219ENST00000542112 SHOXO15266 292 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms