RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 LDHAP00338 332 aaKnown RBP15.98■□□□□ 0.15
CNOT9-208ENST00000542068 CACNA2D1P54289 1103 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 CDK16Q00536 496 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 TMEM62Q0P6H9 643 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 VGLL4Q14135 290 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 KLHL38Q2WGJ6 581 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 SH3PXD2AQ5TCZ1 1133 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 KBTBD2Q8IY47 623 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 FAF2Q96CS3 445 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 OXNAD1Q96HP4 312 aaPredicted RBP15.98■□□□□ 0.15
CNOT9-208ENST00000542068 VCXQ9H320 206 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 PIH1D1Q9NWS0 290 aaKnown RBP15.98■□□□□ 0.15
CNOT9-208ENST00000542068 MAP3K20Q9NYL2 800 aaKnown RBP15.98■□□□□ 0.15
CNOT9-208ENST00000542068 AKT3Q9Y243 479 aa15.98■□□□□ 0.15
CNOT9-208ENST00000542068 DNAH12Q6ZR08 3092 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 ARHGAP42A6NI28 874 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 DDNO94850 711 aaPredicted RBP15.97■□□□□ 0.15
CNOT9-208ENST00000542068 TNNC2P02585 160 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 CALRP27797 417 aaKnown RBP15.97■□□□□ 0.15
CNOT9-208ENST00000542068 SERPINB4P48594 390 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 PAPOLAP51003 745 aaKnown RBP15.97■□□□□ 0.15
CNOT9-208ENST00000542068 ZNF200P98182 395 aaPredicted RBP15.97■□□□□ 0.15
CNOT9-208ENST00000542068 SLC34A1Q06495 639 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 FAM160B1Q5W0V3 765 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 ADGRD1Q6QNK2 874 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 ENDOVQ8N8Q3 282 aaKnown RBP15.97■□□□□ 0.15
CNOT9-208ENST00000542068 KLRG1Q96E93 195 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 MRPL4Q9BYD3 311 aaKnown RBP15.97■□□□□ 0.15
CNOT9-208ENST00000542068 KCNK13Q9HB14 408 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 RAB6BQ9NRW1 208 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 GPATCH2LQ9NWQ4 482 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 STBD1O95210 358 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 CALB1P05937 261 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 RGS7P49802 495 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 SGSM1Q2NKQ1 1148 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 EEF1DP3Q658K8 133 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 TREML1Q86YW5 311 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 WDTC1Q8N5D0 677 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 RDM1Q8NG50 284 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 PPP1R14CQ8TAE6 165 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 SEPT1Q8WYJ6 367 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 USP6NLQ92738 828 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 CCDC124Q96CT7 223 aaKnown RBP15.97■□□□□ 0.15
CNOT9-208ENST00000542068 CLMNQ96JQ2 1002 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 SNCAIPQ9Y6H5 919 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 C19orf81C9J6K1 198 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 ITGAVP06756 1048 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 LAMTOR4Q0VGL1 99 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 CHI3L2Q15782 390 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 PPP1R15BQ5SWA1 713 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 MROH9Q5TGP6 573 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 RGS9BPQ6ZS82 235 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 POU5F2Q8N7G0 328 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 PTCD3Q96EY7 689 aaKnown RBP15.97■□□□□ 0.15
CNOT9-208ENST00000542068 ZBED3Q96IU2 234 aaPredicted RBP15.97■□□□□ 0.15
CNOT9-208ENST00000542068 HEXIM2Q96MH2 286 aaKnown RBP15.97■□□□□ 0.15
CNOT9-208ENST00000542068 SRPK1Q96SB4 655 aaKnown RBP15.97■□□□□ 0.15
CNOT9-208ENST00000542068 CGRRF1Q99675 332 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 APOL6Q9BWW8 343 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 SAR1AQ9NR31 198 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 PCMTD2Q9NV79 361 aa15.97■□□□□ 0.15
CNOT9-208ENST00000542068 A0A0B4J269 797 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 CXorf49A8MYA2 514 aaPredicted RBP15.96■□□□□ 0.15
CNOT9-208ENST00000542068 I3L4J1 428 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 IRF6O14896 467 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 MCF2LO15068 1137 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 LRCH4O75427 683 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 ACADSP16219 412 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 TBXAS1P24557 533 aaPredicted RBP15.96■□□□□ 0.15
CNOT9-208ENST00000542068 UBAP2LQ14157 1087 aaKnown RBP15.96■□□□□ 0.15
CNOT9-208ENST00000542068 PTPN20Q4JDL3 420 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 NAT8LQ8N9F0 302 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 SLC35B2Q8TB61 432 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 CPB2Q96IY4 423 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 SH3GL3Q99963 347 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 DRG1Q9Y295 367 aaKnown RBP15.96■□□□□ 0.15
CNOT9-208ENST00000542068 IQANK1A0A1B0GTG1 560 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.96■□□□□ 0.15
CNOT9-208ENST00000542068 ADCY3O60266 1144 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 ITGBL1O95965 494 aaPredicted RBP15.96■□□□□ 0.15
CNOT9-208ENST00000542068 EPHB1P54762 984 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 AQP5P55064 265 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 C1orf146Q5VVC0 180 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 SULF1Q8IWU6 871 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 ZNF276Q8N554 614 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 ARFGAP1Q8N6T3 406 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 MMP19Q99542 508 aa15.96■□□□□ 0.15
CNOT9-208ENST00000542068 FARP1Q9Y4F1 1045 aaPredicted RBP15.96■□□□□ 0.15
CNOT9-208ENST00000542068 QSER1Q2KHR3 1735 aa15.96■□□□□ 0.14
CNOT9-208ENST00000542068 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.95■□□□□ 0.14
CNOT9-208ENST00000542068 TOM1L1O75674 476 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 BSPRYQ5W0U4 402 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 IZUMO2Q6UXV1 221 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 NETO2Q8NC67 525 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 RBM15BQ8NDT2 890 aaKnown RBP15.95■□□□□ 0.14
CNOT9-208ENST00000542068 SMC1BQ8NDV3 1235 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 NKD2Q969F2 451 aaPredicted RBP15.95■□□□□ 0.14
CNOT9-208ENST00000542068 TRIM4Q9C037 500 aa15.95■□□□□ 0.14
CNOT9-208ENST00000542068 DHX33Q9H6R0 707 aaKnown RBP15.95■□□□□ 0.14
CNOT9-208ENST00000542068 CYP4F11Q9HBI6 524 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms