RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 PLVAPQ9BX97 442 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 PCDH10Q9P2E7 1040 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 NT5C1B-RDH14C9J2C7 533 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 ACRP10323 421 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 GPD1P21695 349 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 PBX3P40426 434 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 ZNF143P52747 638 aaPredicted RBP9.1□□□□□ -0.95
THBS3-210ENST00000541576 GNGT1P63211 74 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 ELAVL2Q12926 359 aaKnown RBP9.1□□□□□ -0.95
THBS3-210ENST00000541576 CLUL1Q15846 466 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 ATP13A4Q4VNC1 1196 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 VARS2Q5ST30 1063 aaKnown RBP9.1□□□□□ -0.95
THBS3-210ENST00000541576 TRNP1Q6NT89 227 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 FUT10Q6P4F1 479 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 LRRTM3Q86VH5 581 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 GIMAP7Q8NHV1 300 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 KCTD13Q8WZ19 329 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 KHSRPQ92945 711 aaKnown RBP eCLIP9.1□□□□□ -0.95
THBS3-210ENST00000541576 SMOQ99835 787 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 GPR62Q9BZJ7 368 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 YY1AP1Q9H869 796 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 LRRC4Q9HBW1 653 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 CD248Q9HCU0 757 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 TMLHEQ9NVH6 421 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 DMGDHQ9UI17 866 aaKnown RBP9.1□□□□□ -0.95
THBS3-210ENST00000541576 LTBP2Q14767 1821 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 TCRBV7S2A1N4TA0A589 114 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 GOLGA6CA6NDK9 693 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 C2CD4BA6NLJ0 364 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 KRIT1O00522 736 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 GOLGA6DP0CG33 693 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 PDGFRAP16234 1089 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 GJC1P36383 396 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 FLT3P36888 993 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 SCNN1AP37088 669 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 ALDH7A1P49419 539 aaKnown RBP9.1□□□□□ -0.95
THBS3-210ENST00000541576 WDR5P61964 334 aaKnown RBP9.1□□□□□ -0.95
THBS3-210ENST00000541576 SLC7A5Q01650 507 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 ADIGQ0VDE8 80 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 TXNRD3NBQ6F5E7 133 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 KLHL7Q8IXQ5 586 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 SIX6OS1Q8N1H7 587 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 FAM71BQ8TC56 605 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 RXFP2Q8WXD0 754 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 KRT12Q99456 494 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 GOLGA6AQ9NYA3 693 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 PRKAG2Q9UGJ0 569 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 SUFUQ9UMX1 484 aa9.1□□□□□ -0.95
THBS3-210ENST00000541576 RNF8O76064 485 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 FGFR3P22607 806 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 BDNFP23560 247 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 HNRNPH1P31943 449 aaKnown RBP9.09□□□□□ -0.95
THBS3-210ENST00000541576 RABGGTBP53611 331 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 DEFB103AP81534 67 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 ACAP1Q15027 740 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 LRRC38Q5VT99 294 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 FAM117BQ6P1L5 589 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 C4orf50Q6ZRC1 276 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 SLC26A9Q7LBE3 791 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 ANKS1BQ7Z6G8 1248 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 TMEM173Q86WV6 379 aaPredicted RBP9.09□□□□□ -0.95
THBS3-210ENST00000541576 DCP1BQ8IZD4 617 aaKnown RBP9.09□□□□□ -0.95
THBS3-210ENST00000541576 CLEC4CQ8WTT0 213 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 KCNK16Q96T55 309 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 HERPUD2Q9BSE4 406 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 CNPY3Q9BT09 278 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 RHOBTB2Q9BYZ6 727 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 TMEM30AQ9NV96 361 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 ASNSD1Q9NWL6 643 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 RAB21Q9UL25 225 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 VWA8A3KMH1 1905 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 LRCH4O75427 683 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 BAIAP3O94812 1187 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 SDC4P31431 198 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 TKTL1P51854 596 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 CACNA2D1P54289 1103 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 CTXN3Q4LDR2 81 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 ZNF280DQ6N043 979 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 SND1Q7KZF4 910 aaKnown RBP eCLIP9.09□□□□□ -0.95
THBS3-210ENST00000541576 TMCO2Q7Z6W1 182 aaPredicted RBP9.09□□□□□ -0.95
THBS3-210ENST00000541576 SPATA2LQ8IUW3 424 aaPredicted RBP9.09□□□□□ -0.95
THBS3-210ENST00000541576 KATNAL2Q8IYT4 538 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 SH2D3CQ8N5H7 860 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 ZMIZ2Q8NF64 920 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 FAM76AQ8TAV0 307 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 ZCWPW1Q9H0M4 648 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 CSNK1G1Q9HCP0 422 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 DMAP1Q9NPF5 467 aaPredicted RBP9.09□□□□□ -0.95
THBS3-210ENST00000541576 IL23AQ9NPF7 189 aa9.09□□□□□ -0.95
THBS3-210ENST00000541576 OR4Q2P0C623 313 aa9.09□□□□□ -0.96
THBS3-210ENST00000541576 DESP17661 470 aa9.09□□□□□ -0.96
THBS3-210ENST00000541576 RDXP35241 583 aaKnown RBP9.09□□□□□ -0.96
THBS3-210ENST00000541576 HADHQ16836 314 aaKnown RBP9.09□□□□□ -0.96
THBS3-210ENST00000541576 SLC39A12Q504Y0 691 aa9.09□□□□□ -0.96
THBS3-210ENST00000541576 RAB6CQ53S08 254 aa9.09□□□□□ -0.96
THBS3-210ENST00000541576 EFHC1Q5JVL4 640 aa9.09□□□□□ -0.96
THBS3-210ENST00000541576 SPOUT1Q5T280 376 aaKnown RBP9.09□□□□□ -0.96
THBS3-210ENST00000541576 ZFYVE27Q5T4F4 411 aa9.09□□□□□ -0.96
THBS3-210ENST00000541576 SH3PXD2AQ5TCZ1 1133 aa9.09□□□□□ -0.96
THBS3-210ENST00000541576 CCDC70Q6NSX1 233 aa9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms