RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 FCHO2Q0JRZ9 810 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 TRAPPC11Q7Z392 1133 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 ZFRQ96KR1 1074 aaKnown RBP15.84■□□□□ 0.13
HMGA2-210ENST00000541363 JPH1Q9HDC5 661 aaPredicted RBP15.84■□□□□ 0.13
HMGA2-210ENST00000541363 TTC26A0AVF1 554 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 PHGDHO43175 533 aaKnown RBP15.84■□□□□ 0.13
HMGA2-210ENST00000541363 EFHC1Q5JVL4 640 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 NECAB2Q7Z6G3 386 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 DCP1BQ8IZD4 617 aaKnown RBP15.84■□□□□ 0.13
HMGA2-210ENST00000541363 RIN2Q8WYP3 895 aaPredicted RBP15.84■□□□□ 0.13
HMGA2-210ENST00000541363 PUS3Q9BZE2 481 aaKnown RBP15.84■□□□□ 0.13
HMGA2-210ENST00000541363 RNF146Q9NTX7 359 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 SNX9Q9Y5X1 595 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.84■□□□□ 0.13
HMGA2-210ENST00000541363 KPNA6O60684 536 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 FASP25445 335 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 PCSK1P29120 753 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 PTSQ03393 145 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 ZNF177Q13360 481 aaPredicted RBP15.84■□□□□ 0.13
HMGA2-210ENST00000541363 NCOA4Q13772 614 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 TMEM132BQ14DG7 1078 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 MARCH10Q8NA82 808 aaPredicted RBP15.84■□□□□ 0.13
HMGA2-210ENST00000541363 FAM120BQ96EK7 910 aaKnown RBP15.84■□□□□ 0.13
HMGA2-210ENST00000541363 C9orf72Q96LT7 481 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 SLITRK1Q96PX8 696 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 MOV10L1Q9BXT6 1211 aaKnown RBP15.84■□□□□ 0.13
HMGA2-210ENST00000541363 PAIP1Q9H074 479 aaKnown RBP15.84■□□□□ 0.13
HMGA2-210ENST00000541363 PRKAG3Q9UGI9 489 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 AAR2Q9Y312 384 aaKnown RBP15.84■□□□□ 0.13
HMGA2-210ENST00000541363 CAMK1DQ8IU85 385 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 SETD9Q8NE22 299 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 UCMAQ8WVF2 138 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 CCDC182A6NF36 153 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 ASS1P00966 412 aaKnown RBP15.84■□□□□ 0.13
HMGA2-210ENST00000541363 UQCRBP14927 111 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 CCNA2P20248 432 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 BLOC1S5Q8TDH9 187 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 WRNIP1Q96S55 665 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 TMEM106CQ9BVX2 250 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 LOC102724428A0A0B4J2F2 783 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 H3BN98 237 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 IDH3BO43837 385 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 FAM58BPP0C7Q3 252 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 ALDH9A1P49189 494 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 SIK1P57059 783 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 TOMM20Q15388 145 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 IER5Q5VY09 327 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 FAM220AQ7Z4H9 259 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 SERAC1Q96JX3 654 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 DNAJC1Q96KC8 554 aaKnown RBP15.84■□□□□ 0.13
HMGA2-210ENST00000541363 SLCO1B7G3V0H7 640 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 UMPSP11172 480 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 NCAM1P13591 858 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 IQCF2Q8IXL9 164 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 NT5C1AQ9BXI3 368 aa15.84■□□□□ 0.13
HMGA2-210ENST00000541363 OSBPL5Q9H0X9 879 aaPredicted RBP15.84■□□□□ 0.13
HMGA2-210ENST00000541363 HK2P52789 917 aa15.83■□□□□ 0.13
HMGA2-210ENST00000541363 SHCBP1LQ9BZQ2 653 aa15.83■□□□□ 0.13
HMGA2-210ENST00000541363 ACAD9Q9H845 621 aa15.83■□□□□ 0.13
HMGA2-210ENST00000541363 CAB39LQ9H9S4 337 aa15.83■□□□□ 0.13
HMGA2-210ENST00000541363 PPP2R3BQ9Y5P8 575 aa15.83■□□□□ 0.13
HMGA2-210ENST00000541363 TMEM114B3SHH9 223 aa15.83■□□□□ 0.13
HMGA2-210ENST00000541363 HIST1H2ABP04908 130 aa15.83■□□□□ 0.13
HMGA2-210ENST00000541363 ITGA8P53708 1063 aa15.83■□□□□ 0.13
HMGA2-210ENST00000541363 ALG11Q2TAA5 492 aa15.83■□□□□ 0.13
HMGA2-210ENST00000541363 HIST3H2AQ7L7L0 130 aa15.83■□□□□ 0.13
HMGA2-210ENST00000541363 CROCCP3Q8IVE0 287 aa15.83■□□□□ 0.13
HMGA2-210ENST00000541363 ARID3BQ8IVW6 561 aaPredicted RBP15.83■□□□□ 0.13
HMGA2-210ENST00000541363 GUF1Q8N442 669 aaKnown RBP15.83■□□□□ 0.13
HMGA2-210ENST00000541363 HIST1H2ACQ93077 130 aa15.83■□□□□ 0.13
HMGA2-210ENST00000541363 CHORDC1Q9UHD1 332 aaPredicted RBP15.83■□□□□ 0.13
HMGA2-210ENST00000541363 ZNF222Q9UK12 451 aa15.83■□□□□ 0.13
HMGA2-210ENST00000541363 ATP9AO75110 1047 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 SNX4O95219 450 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 CALB2P22676 271 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 LRRC74BQ6ZQY2 392 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 SH3RF3Q8TEJ3 882 aaPredicted RBP15.83■□□□□ 0.12
HMGA2-210ENST00000541363 GPR101Q96P66 508 aaPredicted RBP15.83■□□□□ 0.12
HMGA2-210ENST00000541363 CLPBQ9H078 707 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 TLR7Q9NYK1 1049 aaKnown RBP15.83■□□□□ 0.12
HMGA2-210ENST00000541363 ECE2O60344 883 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 ACADMP11310 421 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 GOLGA7BQ2TAP0 167 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 GPRC5DQ9NZD1 345 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 HEY2Q9UBP5 337 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 IQCMA0A1B0GVH7 501 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 PRODHO43272 600 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 SLC2A3P11169 496 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 NQO1P15559 274 aaKnown RBP15.83■□□□□ 0.12
HMGA2-210ENST00000541363 GEMP55040 296 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 SLC18A3Q16572 532 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 CD209Q9NNX6 404 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 ENTPD7Q9NQZ7 604 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 MGAT4AQ9UM21 535 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 ABCA5Q8WWZ7 1642 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 USP17L10C9JJH3 530 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 IFRD1O00458 451 aaPredicted RBP15.83■□□□□ 0.12
HMGA2-210ENST00000541363 STAU1O95793 577 aaKnown RBP15.83■□□□□ 0.12
HMGA2-210ENST00000541363 SLC11A2P49281 568 aa15.83■□□□□ 0.12
HMGA2-210ENST00000541363 TXNRD1Q16881 649 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms