RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 LYSMD4Q5XG99 296 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 LMBRD2Q68DH5 695 aaPredicted RBP7.79□□□□□ -1.16
YBX3-209ENST00000540747 ARMCX6Q7L4S7 300 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 BRAPQ7Z569 592 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 PROSER1Q86XN7 944 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 MIB1Q86YT6 1006 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 TTC16Q8NEE8 873 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 KCNV2Q8TDN2 545 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 HPDLQ96IR7 371 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 SPACA7Q96KW9 195 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 NUSAP1Q9BXS6 441 aaKnown RBP7.79□□□□□ -1.16
YBX3-209ENST00000540747 MRPL44Q9H9J2 332 aaKnown RBP7.79□□□□□ -1.16
YBX3-209ENST00000540747 POLMQ9NP87 494 aaPredicted RBP7.79□□□□□ -1.16
YBX3-209ENST00000540747 ZDHHC4Q9NPG8 344 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 FSCN3Q9NQT6 498 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 ARHGEF4Q9NR80 690 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 DNAAF2Q9NVR5 837 aaKnown RBP7.79□□□□□ -1.16
YBX3-209ENST00000540747 SMPD4Q9NXE4 827 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 IL37Q9NZH6 218 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 CFAP97Q9P2B7 532 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 FBXO2Q9UK22 296 aaPredicted RBP7.79□□□□□ -1.16
YBX3-209ENST00000540747 SLC6A14Q9UN76 642 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 LHX6Q9UPM6 363 aa7.79□□□□□ -1.16
YBX3-209ENST00000540747 MORC2Q9Y6X9 1032 aaPredicted RBP7.79□□□□□ -1.16
YBX3-209ENST00000540747 ATXN2Q99700 1313 aaKnown RBP7.78□□□□□ -1.16
YBX3-209ENST00000540747 KNL1Q8NG31 2342 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 A0A087X0B3 334 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 IGHV1OR15-9A0A0B4J2B8 117 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 TCRBV21S2A2A0A5A6 115 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 FAM92AA1XBS5 289 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.78□□□□□ -1.16
YBX3-209ENST00000540747 H0Y626 953 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 H3BQV1 296 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 KIAA0391O15091 583 aaKnown RBP7.78□□□□□ -1.16
YBX3-209ENST00000540747 TRIM16O95361 564 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 GCNT3O95395 438 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 STAU1O95793 577 aaKnown RBP7.78□□□□□ -1.16
YBX3-209ENST00000540747 ADH1CP00326 375 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 KRT19P08727 400 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 TMEM191BP0C7N4 346 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 GRIK1P39086 918 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 KDSRQ06136 332 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 MYO1EQ12965 1108 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 BYSLQ13895 437 aaKnown RBP7.78□□□□□ -1.16
YBX3-209ENST00000540747 RABEP1Q15276 862 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 DUOXA1Q1HG43 343 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 MDH1BQ5I0G3 518 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 DDX42Q86XP3 938 aaKnown RBP eCLIP7.78□□□□□ -1.16
YBX3-209ENST00000540747 CBWD2Q8IUF1 395 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 WDR49Q8IV35 697 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 SLC41A1Q8IVJ1 513 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 GPD1LQ8N335 351 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 TERB1Q8NA31 727 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 GLIS3Q8NEA6 775 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 CEP76Q8TAP6 659 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 HMGB4Q8WW32 186 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 OVCA2Q8WZ82 227 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 WBP2Q969T9 261 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 OTUB2Q96DC9 234 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 MRPL45Q9BRJ2 306 aaKnown RBP7.78□□□□□ -1.16
YBX3-209ENST00000540747 ZNF518BQ9C0D4 1074 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 PCIF1Q9H4Z3 704 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 SLC32A1Q9H598 525 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 EHD2Q9NZN4 543 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 TBC1D7Q9P0N9 293 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 CALCOCO1Q9P1Z2 691 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 TBC1D14Q9P2M4 693 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 STARD13Q9Y3M8 1113 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 GPSM3Q9Y4H4 160 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 PCDHB13Q9Y5F0 798 aa7.78□□□□□ -1.16
YBX3-209ENST00000540747 SRPRBQ9Y5M8 271 aaKnown RBP7.78□□□□□ -1.16
YBX3-209ENST00000540747 ARHGAP33O14559 1287 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 TRIM24O15164 1050 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 AP5Z1O43299 807 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 COCHO43405 550 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 TULP3O75386 442 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 PRPF6O94906 941 aaKnown RBP7.77□□□□□ -1.17
YBX3-209ENST00000540747 PDGFRBP09619 1106 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 PTPN1P18031 435 aaKnown RBP7.77□□□□□ -1.17
YBX3-209ENST00000540747 ANXA13P27216 316 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 TUBP50607 506 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 CYP27A1Q02318 531 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 GAD2Q05329 585 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 ZNF33AQ06730 810 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 DUOXA2Q1HG44 320 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 ZNF423Q2M1K9 1284 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 SLC36A4Q6YBV0 504 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 PAQR9Q6ZVX9 377 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 SV2BQ7L1I2 683 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 EPM2AIP1Q7L775 607 aaPredicted RBP7.77□□□□□ -1.17
YBX3-209ENST00000540747 TRAPPC11Q7Z392 1133 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 RABEPKQ7Z6M1 372 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 BBS7Q8IWZ6 715 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 CHCHD4Q8N4Q1 142 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 MINDY1Q8N5J2 469 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 OR2I1PQ8NGU4 316 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 RASSF8Q8NHQ8 419 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 ADAMTS14Q8WXS8 1223 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 P2RY11Q96G91 374 aa7.77□□□□□ -1.17
YBX3-209ENST00000540747 ANKRD36BP1Q96IX9 119 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms