RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 ITGBL1O95965 494 aaPredicted RBP9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 UCHL3P15374 230 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 KCNA2P16389 499 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 SLC9A1P19634 815 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 ABCB4P21439 1286 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 ANXA13P27216 316 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 CIITAP33076 1130 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 PCYT1AP49585 367 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 STAT2P52630 851 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 DNAL1Q4LDG9 190 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 FAM91A1Q658Y4 838 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 NANOGP8Q6NSW7 305 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 DPY19L2P1Q6NXN4 242 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 AMIGO2Q86SJ2 522 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 RAVER1Q8IY67 606 aaKnown RBP9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 TTC39CQ8N584 583 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 LSM14AQ8ND56 463 aaKnown RBP9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 PPP1R14CQ8TAE6 165 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 MORC4Q8TE76 937 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 SCFD1Q8WVM8 642 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 TMIGD2Q96BF3 282 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 SPATA17Q96L03 361 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 CNBD2Q96M20 576 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 Q9H521 79 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 SIAEQ9HAT2 523 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 ASIC3Q9UHC3 531 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 PRR12Q9ULL5 1215 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 DTNAQ9Y4J8 743 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 PNMA6FA0A0J9YX94 578 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 FAM170AA1A519 330 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 MYMKA6NI61 221 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 ZBTB5O15062 677 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 MCF2LO15068 1137 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 TYROBPO43914 113 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 GGPS1O95749 300 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 SRGAP2CP0DJJ0 459 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 SRGAP2BP0DMP2 458 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 KRT15P19012 456 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 ITIH2P19823 946 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 GCAP28676 217 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 ITGA8P53708 1063 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 ARL4CP56559 192 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 C21orf59P57076 290 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 ZNF200P98182 395 aaPredicted RBP9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 KRT17Q04695 432 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 KDSRQ06136 332 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 SF3B4Q15427 424 aaKnown RBP eCLIP9.86□□□□□ -0.831e-6■■■■■ 27.7
CTNNA1-243ENST00000540387 ZNF829Q3KNS6 432 aaPredicted RBP9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 MDH1BQ5I0G3 518 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 EFHC1Q5JVL4 640 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 LDLRAD1Q5T700 205 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 PPP1R2P3Q6NXS1 205 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 DYMQ7RTS9 669 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 GALNT4Q8N4A0 578 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 RASGRP4Q8TDF6 673 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 LPAR1Q92633 364 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 OTUD5Q96G74 571 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 C9orf72Q96LT7 481 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 CTRCQ99895 268 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 KLC2Q9H0B6 622 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 GPBP1L1Q9HC44 474 aaPredicted RBP9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 BARHL2Q9NY43 387 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 VPS51Q9UID3 782 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 INPP5FQ9Y2H2 1132 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 PCDHB2Q9Y5E7 798 aa9.86□□□□□ -0.83
CTNNA1-243ENST00000540387 TESPA1A2RU30 521 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 UNCXA6NJT0 531 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 CAPN14A8MX76 684 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 PIK3CDO00329 1044 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 CASQ2O14958 399 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 TMEM253P0C7T8 217 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 ADRA1DP25100 572 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 HMOX2P30519 316 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 QRICH1Q2TAL8 776 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 CST9Q5W186 159 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 ALYREFQ86V81 257 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 ANKMY2Q8IV38 441 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 LNX1Q8TBB1 728 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 RAB3IL1Q8TBN0 382 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 ARHGEF26Q96DR7 871 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 DCUN1D1Q96GG9 259 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 RANBP9Q96S59 729 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 NCKIPSDQ9NZQ3 722 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 MTUS1Q9ULD2 1270 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 EXOC1LA0A1B0GW35 172 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 PVALEFA0A1B0GWK0 134 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 C19orf81C9J6K1 198 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 CRTAMO95727 393 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 DLDP09622 509 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 TAL1P17542 331 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 MXI1P50539 228 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 NAPAP54920 295 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 CCNIQ14094 377 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 EGFLAMQ63HQ2 1017 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 RWDD4Q6NW29 188 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 MIER3Q7Z3K6 550 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 ERO1BQ86YB8 467 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 ZNF276Q8N554 614 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 CHURC1Q8WUH1 139 aa9.85□□□□□ -0.83
CTNNA1-243ENST00000540387 SNF8Q96H20 258 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms