RNA–Protein interactions for RNA: ENST00000540057.1

C2CD3-214, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 4

Gene C2CD3, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-214ENST00000540057 TCEAL3Q969E4 200 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 RCC1LQ96I51 464 aaKnown RBP4.41□□□□□ -1.7
C2CD3-214ENST00000540057 LOXL4Q96JB6 756 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 SPATA32Q96LK8 384 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 SPATA25Q9BR10 227 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 EDEM2Q9BV94 578 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 HERC2P3Q9BVR0 1158 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 PLA2G2FQ9BZM2 168 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 LRRCC1Q9C099 1032 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 PLEKHA4Q9H4M7 779 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 AZI2Q9H6S1 392 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 KAT14Q9H8E8 782 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 APEX2Q9UBZ4 518 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 STK39Q9UEW8 545 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 KLK13Q9UKR3 277 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 NAV2Q8IVL1 2488 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 FREM2Q5SZK8 3169 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 SHROOM3Q8TF72 1996 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 NEDD4P46934 1319 aa4.41□□□□□ -1.7
C2CD3-214ENST00000540057 EML5Q05BV3 1969 aa4.4□□□□□ -1.7
C2CD3-214ENST00000540057 ITPR1Q14643 2758 aa4.4□□□□□ -1.7
C2CD3-214ENST00000540057 F5P12259 2224 aa4.4□□□□□ -1.7
C2CD3-214ENST00000540057 IGKV6D-21A0A0A0MT36 114 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 MAN2B1O00754 1011 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 MEIS2O14770 477 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 NRP1O14786 923 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 HBP1O60381 514 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 OFD1O75665 1012 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 C1QL1O75973 258 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 PAPSS2O95340 614 aaPredicted RBP4.4□□□□□ -1.71
C2CD3-214ENST00000540057 C22orf31O95567 290 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 C1RP00736 705 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 PCP11498 1178 aaKnown RBP4.4□□□□□ -1.71
C2CD3-214ENST00000540057 NCAM1P13591 858 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 PLA2G2AP14555 144 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 CSRP1P21291 193 aaKnown RBP4.4□□□□□ -1.71
C2CD3-214ENST00000540057 FGFR4P22455 802 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 MPLP40238 635 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 KCNC1P48547 511 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 NLRP11P59045 1033 aaKnown RBP4.4□□□□□ -1.71
C2CD3-214ENST00000540057 ACTR2P61160 394 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 AMPD2Q01433 879 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 RNASELQ05823 741 aaKnown RBP4.4□□□□□ -1.71
C2CD3-214ENST00000540057 EFEMP1Q12805 493 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 MTMR1Q13613 665 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 RTP5Q14D33 572 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 DAB2IPQ5VWQ8 1189 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 USP17L6PQ6QN14 398 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 MFSD6Q6ZSS7 791 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 KBTBD6Q86V97 674 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 WDR5BQ86VZ2 330 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 CPNE8Q86YQ8 564 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 SPEM1Q8N4L4 309 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 LZTR1Q8N653 840 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 ENAHQ8N8S7 591 aaPredicted RBP4.4□□□□□ -1.71
C2CD3-214ENST00000540057 ITFG1Q8TB96 612 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 HNRNPLLQ8WVV9 542 aaKnown RBP4.4□□□□□ -1.71
C2CD3-214ENST00000540057 RSPH1Q8WYR4 309 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 FAM3CQ92520 227 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 ESR2Q92731 530 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 DNASE1L2Q92874 299 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 LRIG1Q96JA1 1093 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 CDHR1Q96JP9 859 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 ZNF668Q96K58 619 aaPredicted RBP4.4□□□□□ -1.71
C2CD3-214ENST00000540057 NOX5Q96PH1 765 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 PIGSQ96S52 555 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 HNRNPABQ99729 332 aaKnown RBP4.4□□□□□ -1.71
C2CD3-214ENST00000540057 RIOX1Q9H6W3 641 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 VPS45Q9NRW7 570 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 C2orf42Q9NWW7 574 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 MARCH5Q9NX47 278 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 DACT1Q9NYF0 836 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 GULP1Q9UBP9 304 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 SLC9A2Q9UBY0 812 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 MAD2L2Q9UI95 211 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 SSX2IPQ9Y2D8 614 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 INPP5FQ9Y2H2 1132 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 FAN1Q9Y2M0 1017 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 PCDHGA5Q9Y5G8 931 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 UBIAD1Q9Y5Z9 338 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 PCNX2A6NKB5 2137 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 LAMA5O15230 3695 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 COL1A2P08123 1366 aa4.4□□□□□ -1.71
C2CD3-214ENST00000540057 PDCD11Q14690 1871 aaKnown RBP4.39□□□□□ -1.71
C2CD3-214ENST00000540057 IGSF10Q6WRI0 2623 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 FAM221BA6H8Z2 402 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 CDX4O14627 284 aaPredicted RBP4.39□□□□□ -1.71
C2CD3-214ENST00000540057 MAFGO15525 162 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 CYTH3O43739 400 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 ECI2O75521 394 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 CSDE1O75534 798 aaKnown RBP4.39□□□□□ -1.71
C2CD3-214ENST00000540057 PPM1BO75688 479 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 ALDH2P05091 517 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 DARSP14868 501 aaKnown RBP4.39□□□□□ -1.71
C2CD3-214ENST00000540057 HOXA6P31267 233 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 NASPP49321 788 aaPredicted RBP4.39□□□□□ -1.71
C2CD3-214ENST00000540057 GLUD2P49448 558 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 SEPHS1P49903 392 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 SLC26A2P50443 739 aa4.39□□□□□ -1.71
C2CD3-214ENST00000540057 CLCN3P51790 818 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms