RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 STRIP2Q9ULQ0 834 aa19.91■□□□□ 0.78
TNFRSF1A-213ENST00000540022 INSL5Q9Y5Q6 135 aa19.91■□□□□ 0.78
TNFRSF1A-213ENST00000540022 TCRBV5S1A1TA0A578 114 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 USP27XA6NNY8 438 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 CYP1A2P05177 515 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 MYBL1P10243 752 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 EPCAMP16422 314 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 GSCP56915 257 aaPredicted RBP19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 HYAL1Q12794 435 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 ZNF268Q14587 947 aaPredicted RBP19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 LIN9Q5TKA1 542 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 OR6B2Q6IFH4 312 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 FAM183BPQ6ZVS7 135 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 REXO1L1PQ8IX06 675 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 NUP93Q8N1F7 819 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 SIX6OS1Q8N1H7 587 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 C17orf53Q8N3J3 647 aaPredicted RBP19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 VN1R2Q8NFZ6 395 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 SLC7A14Q8TBB6 771 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 CLEC4CQ8WTT0 213 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 HLA-CQ95604 372 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 MCRS1Q96EZ8 462 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 ULBP1Q9BZM6 244 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 IGFLR1Q9H665 355 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 TLE6Q9H808 572 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 USP3Q9Y6I4 520 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 DUSP10Q9Y6W6 482 aa19.9■□□□□ 0.78
TNFRSF1A-213ENST00000540022 ZSCAN12O43309 604 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 GJB6O95452 261 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 C1RP00736 705 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 C8AP07357 584 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 ARHGAP25P42331 645 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 SNX16P57768 344 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 USP46P62068 366 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 TWF1Q12792 350 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 KIF5AQ12840 1032 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 IFRD2Q12894 506 aaPredicted RBP19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 MTMR3Q13615 1198 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 DUSP6Q16828 381 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 PLEKHA7Q6IQ23 1121 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 OLFML1Q6UWY5 402 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 DENND5BQ6ZUT9 1274 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 CCAR2Q8N163 923 aaKnown RBP19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 NDRG1Q92597 394 aaKnown RBP19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 AVENQ9NQS1 362 aaPredicted RBP19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 WDR35Q9P2L0 1181 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 SALL4Q9UJQ4 1053 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 HCFC2Q9Y5Z7 792 aa19.89■□□□□ 0.77
TNFRSF1A-213ENST00000540022 SLC38A8A6NNN8 435 aa19.88■□□□□ 0.77
TNFRSF1A-213ENST00000540022 GOLGA8SH3BPF8 625 aa19.88■□□□□ 0.77
TNFRSF1A-213ENST00000540022 LINC01565O15544 149 aa19.88■□□□□ 0.77
TNFRSF1A-213ENST00000540022 USP17L7P0C7H9 530 aa19.88■□□□□ 0.77
TNFRSF1A-213ENST00000540022 ALDH1A3P47895 512 aa19.88■□□□□ 0.77
TNFRSF1A-213ENST00000540022 KCNQ1P51787 676 aa19.88■□□□□ 0.77
TNFRSF1A-213ENST00000540022 MAMLD1Q13495 774 aa19.88■□□□□ 0.77
TNFRSF1A-213ENST00000540022 CCDC149Q6ZUS6 474 aa19.88■□□□□ 0.77
TNFRSF1A-213ENST00000540022 C3orf20Q8ND61 904 aa19.88■□□□□ 0.77
TNFRSF1A-213ENST00000540022 CEP295NLQ96MC4 621 aa19.88■□□□□ 0.77
TNFRSF1A-213ENST00000540022 LZTFL1Q9NQ48 299 aa19.88■□□□□ 0.77
TNFRSF1A-213ENST00000540022 CNGB3Q9NQW8 809 aa19.88■□□□□ 0.77
TNFRSF1A-213ENST00000540022 MAN1C1Q9NR34 630 aa19.88■□□□□ 0.77
TNFRSF1A-213ENST00000540022 IL37Q9NZH6 218 aa19.88■□□□□ 0.77
TNFRSF1A-213ENST00000540022 NCANO14594 1321 aa19.88■□□□□ 0.77
TNFRSF1A-213ENST00000540022 PTPRDP23468 1912 aa19.87■□□□□ 0.77
TNFRSF1A-213ENST00000540022 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.87■□□□□ 0.77
TNFRSF1A-213ENST00000540022 ZBED1O96006 694 aa19.87■□□□□ 0.77
TNFRSF1A-213ENST00000540022 BMP1P13497 986 aa19.87■□□□□ 0.77
TNFRSF1A-213ENST00000540022 DAOAP59103 153 aa19.87■□□□□ 0.77
TNFRSF1A-213ENST00000540022 SLC6A3Q01959 620 aa19.87■□□□□ 0.77
TNFRSF1A-213ENST00000540022 PM20D1Q6GTS8 502 aa19.87■□□□□ 0.77
TNFRSF1A-213ENST00000540022 ZNF662Q6ZS27 426 aa19.87■□□□□ 0.77
TNFRSF1A-213ENST00000540022 ZDHHC17Q8IUH5 632 aa19.87■□□□□ 0.77
TNFRSF1A-213ENST00000540022 TXLNBQ8N3L3 684 aa19.87■□□□□ 0.77
TNFRSF1A-213ENST00000540022 RFFLQ8WZ73 363 aa19.87■□□□□ 0.77
TNFRSF1A-213ENST00000540022 KHSRPQ92945 711 aaKnown RBP eCLIP19.87■□□□□ 0.77
TNFRSF1A-213ENST00000540022 PLEKHA4Q9H4M7 779 aa19.87■□□□□ 0.77
TNFRSF1A-213ENST00000540022 PARVAQ9NVD7 372 aa19.87■□□□□ 0.77
TNFRSF1A-213ENST00000540022 BTNL10A8MVZ5 291 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 FBXO21O94952 628 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 TAF5Q15542 800 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 AAK1Q2M2I8 961 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 PPP1R15BQ5SWA1 713 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 FAM102AQ5T9C2 384 aaPredicted RBP19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 DNAJC24Q6P3W2 148 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 BHLHA9Q7RTU4 235 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 SCML4Q8N228 414 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 SLC35G2Q8TBE7 412 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 FEZF2Q8TBJ5 459 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 NUP85Q9BW27 656 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 UBE2ZQ9H832 354 aaPredicted RBP19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 OSGEPQ9NPF4 335 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 METTL5Q9NRN9 209 aaKnown RBP19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 KCND1Q9NSA2 647 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 CTTNBP2NLQ9P2B4 639 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 A0A0A6YYK5 440 aaPredicted RBP19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 FAM92AA1XBS5 289 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 KRT86O43790 486 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 ZMYND10O75800 440 aa19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 RTN3O95197 1032 aaPredicted RBP19.86■□□□□ 0.77
TNFRSF1A-213ENST00000540022 GLP2RO95838 553 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms