RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 CFIP05156 583 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 CXCL8P10145 99 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 PLS3P13797 630 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 HDCP19113 662 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 GUCY2CP25092 1073 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 PTGER3P43115 390 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 TNFRSF4P43489 277 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 TSPY1Q01534 308 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 POU5F1Q01860 360 aaKnown RBP6.38□□□□□ -1.39
CPSF7-219ENST00000539952 SPAG1Q07617 926 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 ST3GAL1Q11201 340 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 GPS2Q13227 327 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 TUBB2AQ13885 445 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 TERF2Q15554 542 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 ZNF77Q15935 545 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 PREPLQ4J6C6 727 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-219ENST00000539952 C9orf57Q5W0N0 161 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 KRT79Q5XKE5 535 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 THSD4Q6ZMP0 1018 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 LRRTM3Q86VH5 581 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 TTC30AQ86WT1 665 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 EFCAB13Q8IY85 973 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 PGBD3Q8N328 593 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 C17orf53Q8N3J3 647 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-219ENST00000539952 CCDC33Q8N5R6 958 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 TTC9BQ8N6N2 239 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 TMEM161BQ8NDZ6 487 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 ENGASEQ8NFI3 743 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 MDGA1Q8NFP4 955 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 OR10T2Q8NGX3 314 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 HNRNPLLQ8WVV9 542 aaKnown RBP6.38□□□□□ -1.39
CPSF7-219ENST00000539952 RLN3Q8WXF3 142 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 KCNN1Q92952 543 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 TRMT2BQ96GJ1 504 aaKnown RBP6.38□□□□□ -1.39
CPSF7-219ENST00000539952 FNBP1Q96RU3 617 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 CYP2S1Q96SQ9 504 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 PNKPQ96T60 521 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 TUBB2BQ9BVA1 445 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 GTPBP2Q9BX10 602 aaKnown RBP6.38□□□□□ -1.39
CPSF7-219ENST00000539952 CCSER1Q9C0I3 900 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 FAM124BQ9H5Z6 455 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-219ENST00000539952 L2HGDHQ9H9P8 463 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 DNAAF2Q9NVR5 837 aaKnown RBP6.38□□□□□ -1.39
CPSF7-219ENST00000539952 KCND2Q9NZV8 630 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 BCCIPQ9P287 314 aaKnown RBP eCLIP6.38□□□□□ -1.39
CPSF7-219ENST00000539952 LARSQ9P2J5 1176 aaKnown RBP6.38□□□□□ -1.39
CPSF7-219ENST00000539952 DKK4Q9UBT3 224 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 HOOK1Q9UJC3 728 aaKnown RBP6.38□□□□□ -1.39
CPSF7-219ENST00000539952 MAGED2Q9UNF1 606 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-219ENST00000539952 V9GYY5 206 aaPredicted RBP6.38□□□□□ -1.39
CPSF7-219ENST00000539952 PDCD11Q14690 1871 aaKnown RBP6.38□□□□□ -1.39
CPSF7-219ENST00000539952 NUP205Q92621 2012 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 CACNA1EQ15878 2313 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 IGF2RP11717 2491 aa6.38□□□□□ -1.39
CPSF7-219ENST00000539952 PI4KAP42356 2102 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 ADAMTS20P59510 1910 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 ANO9A1A5B4 782 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 KPNA7A9QM74 516 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 OGTO15294 1046 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 ACTN4O43707 911 aaKnown RBP6.37□□□□□ -1.39
CPSF7-219ENST00000539952 ZNF217O75362 1048 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 AP1G2O75843 785 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 NOL4O94818 638 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 APODP05090 189 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 CKMP06732 381 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 NFICP08651 508 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 SLFN14P0C7P3 912 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 MAPTP10636 758 aaKnown RBP6.37□□□□□ -1.39
CPSF7-219ENST00000539952 CD59P13987 128 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 ITPKAP23677 461 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 CDC25AP30304 524 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 NMT1P30419 496 aaKnown RBP6.37□□□□□ -1.39
CPSF7-219ENST00000539952 ABCD1P33897 745 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 EIF2DP41214 584 aaKnown RBP6.37□□□□□ -1.39
CPSF7-219ENST00000539952 GRIA2P42262 883 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 PPP3CCP48454 512 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 TRAPPC10P48553 1259 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 TAF6P49848 677 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 SEC13P55735 322 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 ZNF33AQ06730 810 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 SF3A1Q15459 793 aaKnown RBP6.37□□□□□ -1.39
CPSF7-219ENST00000539952 TUSC1Q2TAM9 212 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 MAP7D1Q3KQU3 841 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 CT47A1Q5JQC4 288 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-219ENST00000539952 SYCP2LQ5T4T6 812 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 DAW1Q8N136 415 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 MINDY1Q8N5J2 469 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 C4orf32Q8N8J7 132 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 ARL14EPQ8N8R7 260 aaPredicted RBP6.37□□□□□ -1.39
CPSF7-219ENST00000539952 IGSF22Q8N9C0 903 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 IL17RCQ8NAC3 791 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 TXNDC5Q8NBS9 432 aaKnown RBP6.37□□□□□ -1.39
CPSF7-219ENST00000539952 LSM14AQ8ND56 463 aaKnown RBP6.37□□□□□ -1.39
CPSF7-219ENST00000539952 SPATA18Q8TC71 538 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 SH3RF2Q8TEC5 729 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 SNX29Q8TEQ0 813 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 LRRC15Q8TF66 581 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 BICD1Q96G01 975 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 CEP295NLQ96MC4 621 aa6.37□□□□□ -1.39
CPSF7-219ENST00000539952 ACBD6Q9BR61 282 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms