RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 CRTAC1Q9NQ79 661 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 AGPAT3Q9NRZ7 376 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 FREM2Q5SZK8 3169 aa15.94■□□□□ 0.14
USB1-203ENST00000539737 MYO18AQ92614 2054 aaKnown RBP15.93■□□□□ 0.14
USB1-203ENST00000539737 SRRM3A6NNA2 597 aaPredicted RBP15.93■□□□□ 0.14
USB1-203ENST00000539737 LEFTY2O00292 366 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 KLF8O95600 359 aaPredicted RBP15.93■□□□□ 0.14
USB1-203ENST00000539737 CYP17A1P05093 508 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 HDCP19113 662 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 HOXD13P35453 343 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 TIE1P35590 1138 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 FAM193AP78312 1265 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 IFRD2Q12894 506 aaPredicted RBP15.93■□□□□ 0.14
USB1-203ENST00000539737 DAB2IPQ5VWQ8 1189 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 RASSF3Q86WH2 238 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 BRSK2Q8IWQ3 736 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 ADGRF2Q8IZF7 708 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 GPD1LQ8N335 351 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 CSGALNACT2Q8N6G5 542 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 TXNDC5Q8NBS9 432 aaKnown RBP15.93■□□□□ 0.14
USB1-203ENST00000539737 ATP2A3Q93084 1043 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 SMARCE1Q969G3 411 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 ACDQ96AP0 544 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 GSDMAQ96QA5 445 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 RNF38Q9H0F5 515 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 KIAA1586Q9HCI6 787 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 TMEM30AQ9NV96 361 aa15.93■□□□□ 0.14
USB1-203ENST00000539737 RBAKQ9NYW8 714 aaPredicted RBP15.93■□□□□ 0.14
USB1-203ENST00000539737 ITPR1Q14643 2758 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 TGFB1I1O43294 461 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 HUS1O60921 280 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 ABL1P00519 1130 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 PDGFRBP09619 1106 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 BDNFP23560 247 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 RPL10AP62906 217 aaKnown RBP15.92■□□□□ 0.14
USB1-203ENST00000539737 NFE2Q16621 373 aaPredicted RBP15.92■□□□□ 0.14
USB1-203ENST00000539737 SOWAHAQ2M3V2 549 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 FBXO43Q4G163 708 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 USP39Q53GS9 565 aaKnown RBP15.92■□□□□ 0.14
USB1-203ENST00000539737 TRIM61Q5EBN2 209 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 C12orf56Q8IXR9 622 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 OR5B17Q8NGF7 314 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 KBTBD7Q8WVZ9 684 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 ZCCHC14Q8WYQ9 949 aaKnown RBP15.92■□□□□ 0.14
USB1-203ENST00000539737 ELMO3Q96BJ8 720 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 TRMT2BQ96GJ1 504 aaKnown RBP15.92■□□□□ 0.14
USB1-203ENST00000539737 CNOT6LQ96LI5 555 aaKnown RBP15.92■□□□□ 0.14
USB1-203ENST00000539737 MYRFLQ96LU7 910 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 ACBD6Q9BR61 282 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 HSPBP1Q9NZL4 362 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 MMP17Q9ULZ9 603 aa15.92■□□□□ 0.14
USB1-203ENST00000539737 PCNX2A6NKB5 2137 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 GOLGA6L22H0YM25 854 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 TRIM24O15164 1050 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 ADAM23O75077 832 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 TMEM191BP0C7N4 346 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 WASP42768 502 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 AMPD2Q01433 879 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 MYL7Q01449 175 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 SURF1Q15526 300 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 CRY1Q16526 586 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 KDF1Q8NAX2 398 aaPredicted RBP15.91■□□□□ 0.14
USB1-203ENST00000539737 HMGB4Q8WW32 186 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 WBP2Q969T9 261 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 ANKRD36BP1Q96IX9 119 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 SYT15Q9BQS2 421 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 CD93Q9NPY3 652 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 ARHGAP26Q9UNA1 814 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 CPQQ9Y646 472 aa15.91■□□□□ 0.14
USB1-203ENST00000539737 ZNF233A6NK53 670 aa15.9■□□□□ 0.14
USB1-203ENST00000539737 ENGP17813 658 aa15.9■□□□□ 0.14
USB1-203ENST00000539737 ITPKAP23677 461 aa15.9■□□□□ 0.14
USB1-203ENST00000539737 CYP27A1Q02318 531 aa15.9■□□□□ 0.14
USB1-203ENST00000539737 RING1Q06587 406 aa15.9■□□□□ 0.14
USB1-203ENST00000539737 GUF1Q8N442 669 aaKnown RBP15.9■□□□□ 0.14
USB1-203ENST00000539737 NAT16Q8N8M0 369 aa15.9■□□□□ 0.14
USB1-203ENST00000539737 IL17RCQ8NAC3 791 aa15.9■□□□□ 0.14
USB1-203ENST00000539737 XXYLT1Q8NBI6 393 aa15.9■□□□□ 0.14
USB1-203ENST00000539737 OLIG1Q8TAK6 271 aa15.9■□□□□ 0.14
USB1-203ENST00000539737 SPATA20Q8TB22 786 aa15.9■□□□□ 0.14
USB1-203ENST00000539737 MRPL45Q9BRJ2 306 aaKnown RBP15.9■□□□□ 0.14
USB1-203ENST00000539737 UXTQ9UBK9 157 aaPredicted RBP15.9■□□□□ 0.14
USB1-203ENST00000539737 ITGA11Q9UKX5 1188 aa15.9■□□□□ 0.14
USB1-203ENST00000539737 SMG1Q96Q15 3661 aaKnown RBP15.9■□□□□ 0.14
USB1-203ENST00000539737 TCRBV21S2A2A0A5A6 115 aa15.89■□□□□ 0.13
USB1-203ENST00000539737 PDXKO00764 312 aa15.89■□□□□ 0.13
USB1-203ENST00000539737 GABRDO14764 452 aa15.89■□□□□ 0.13
USB1-203ENST00000539737 CALUO43852 315 aaPredicted RBP15.89■□□□□ 0.13
USB1-203ENST00000539737 TNNC2P02585 160 aa15.89■□□□□ 0.13
USB1-203ENST00000539737 GRIK1P39086 918 aa15.89■□□□□ 0.13
USB1-203ENST00000539737 CYP2J2P51589 502 aa15.89■□□□□ 0.13
USB1-203ENST00000539737 RBP5P82980 135 aa15.89■□□□□ 0.13
USB1-203ENST00000539737 MYO1EQ12965 1108 aa15.89■□□□□ 0.13
USB1-203ENST00000539737 DHCR24Q15392 516 aa15.89■□□□□ 0.13
USB1-203ENST00000539737 SNRNP35Q16560 246 aaKnown RBP15.89■□□□□ 0.13
USB1-203ENST00000539737 MAP7D1Q3KQU3 841 aa15.89■□□□□ 0.13
USB1-203ENST00000539737 MDH1BQ5I0G3 518 aa15.89■□□□□ 0.13
USB1-203ENST00000539737 ZNF658Q5TYW1 1059 aaPredicted RBP15.89■□□□□ 0.13
USB1-203ENST00000539737 FAM171BQ6P995 826 aa15.89■□□□□ 0.13
USB1-203ENST00000539737 LRRC52Q8N7C0 313 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms