RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 TPGS2Q68CL5 300 aa16.95■□□□□ 0.3
TRAF3-204ENST00000539721 SPRED2Q7Z698 418 aa16.95■□□□□ 0.3
TRAF3-204ENST00000539721 ZNF461Q8TAF7 563 aa16.95■□□□□ 0.3
TRAF3-204ENST00000539721 RXFP2Q8WXD0 754 aa16.95■□□□□ 0.3
TRAF3-204ENST00000539721 KHSRPQ92945 711 aaKnown RBP eCLIP16.95■□□□□ 0.35e-6■□□□□ 10.9
TRAF3-204ENST00000539721 RXFP1Q9HBX9 757 aa16.95■□□□□ 0.3
TRAF3-204ENST00000539721 ENTPD7Q9NQZ7 604 aa16.95■□□□□ 0.3
TRAF3-204ENST00000539721 SNX12Q9UMY4 172 aa16.95■□□□□ 0.3
TRAF3-204ENST00000539721 SAR1BQ9Y6B6 198 aa16.95■□□□□ 0.3
TRAF3-204ENST00000539721 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.94■□□□□ 0.3
TRAF3-204ENST00000539721 C2CD4BA6NLJ0 364 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 C5orf67F2Z3F1 127 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 TNFRSF10BO14763 440 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 LILRB3O75022 631 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 HSF2BPO75031 334 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 SOAT2O75908 522 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 ABLIM3O94929 683 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 CXCL14O95715 111 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 RB1P06400 928 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 PDGFRAP16234 1089 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 RPL10AP62906 217 aaKnown RBP16.94■□□□□ 0.3
TRAF3-204ENST00000539721 AMPD2Q01433 879 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 RAB33AQ14088 237 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 NUP93Q8N1F7 819 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 SPPL3Q8TCT6 385 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 POF1BQ8WVV4 589 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 HES6Q96HZ4 224 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 SAMD11Q96NU1 681 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 TGS1Q96RS0 853 aaKnown RBP16.94■□□□□ 0.3
TRAF3-204ENST00000539721 PSMB7Q99436 277 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 TCF25Q9BQ70 676 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 C11orf84Q9BUA3 381 aaPredicted RBP16.94■□□□□ 0.3
TRAF3-204ENST00000539721 ASNSD1Q9NWL6 643 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 YBX2Q9Y2T7 364 aaKnown RBP16.94■□□□□ 0.3
TRAF3-204ENST00000539721 CEP290O15078 2479 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.94■□□□□ 0.3
TRAF3-204ENST00000539721 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.94■□□□□ 0.3
TRAF3-204ENST00000539721 MIF4GDA9UHW6 222 aaKnown RBP16.94■□□□□ 0.3
TRAF3-204ENST00000539721 TEX28O15482 410 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 CSPG5O95196 566 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 SSR1P43307 286 aaKnown RBP16.94■□□□□ 0.3
TRAF3-204ENST00000539721 ZNF143P52747 638 aaPredicted RBP16.94■□□□□ 0.3
TRAF3-204ENST00000539721 UBE3AQ05086 875 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 DAB2IPQ5VWQ8 1189 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 TRNP1Q6NT89 227 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 ARCQ7LC44 396 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 SCML4Q8N228 414 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 NIPA2Q8N8Q9 360 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 SCAMP5Q8TAC9 235 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 UBE2Q2Q8WVN8 375 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 IRGQQ8WZA9 623 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 USP3Q9Y6I4 520 aa16.94■□□□□ 0.3
TRAF3-204ENST00000539721 YJEFN3A6XGL0 299 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 E7ENQ6 273 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 DAB1O75553 588 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 GLI1P08151 1106 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 CNPP09543 421 aaKnown RBP16.93■□□□□ 0.3
TRAF3-204ENST00000539721 ATF2P15336 505 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 DESP17661 470 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 TCP1P17987 556 aaKnown RBP16.93■□□□□ 0.3
TRAF3-204ENST00000539721 SDC4P31431 198 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 TUFMP49411 452 aaKnown RBP16.93■□□□□ 0.3
TRAF3-204ENST00000539721 ERVFC1P60507 584 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 YWHAZP63104 245 aaKnown RBP16.93■□□□□ 0.3
TRAF3-204ENST00000539721 PLPP4Q5VZY2 271 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 PM20D1Q6GTS8 502 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 CC2D1AQ6P1N0 951 aaPredicted RBP16.93■□□□□ 0.3
TRAF3-204ENST00000539721 UBL4BQ8N7F7 174 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 STKLD1Q8NE28 680 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 GPR152Q8TDT2 470 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 GOLGA1Q92805 767 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 CD101Q93033 1021 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 CFAP57Q96MR6 1250 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 OSBPL9Q96SU4 736 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 CNPY3Q9BT09 278 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 CYP4F11Q9HBI6 524 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 TLR9Q9NR96 1032 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.93■□□□□ 0.3
TRAF3-204ENST00000539721 PLXNA3P51805 1871 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 GREB1Q4ZG55 1949 aa16.93■□□□□ 0.3
TRAF3-204ENST00000539721 DPYSL4O14531 572 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 KCNK3O14649 394 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 DDX3YO15523 660 aaKnown RBP16.92■□□□□ 0.3
TRAF3-204ENST00000539721 SRGAP2O75044 1071 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 SEC24AO95486 1093 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 PRLRP16471 622 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 DNAJB1P25685 340 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 CTNNA2P26232 953 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 CXCR5P32302 372 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 ELF1P32519 619 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 CTNNA1P35221 906 aaKnown RBP16.92■□□□□ 0.3
TRAF3-204ENST00000539721 PBX2P40425 430 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 SMC1AQ14683 1233 aaKnown RBP16.92■□□□□ 0.3
TRAF3-204ENST00000539721 CCDC14Q49A88 953 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 DENND5BQ6ZUT9 1274 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 HFE2Q6ZVN8 426 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 DEFB106AQ8N104 65 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 SPATA17Q96L03 361 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 PBX4Q9BYU1 374 aa16.92■□□□□ 0.3
TRAF3-204ENST00000539721 FBXO44Q9H4M3 255 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms